Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC025034.2-201ENST00000623264 286 ntBASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 AC092192.1-201ENST00000633154 1018 ntBASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 AC005832.2-201ENST00000538921 1430 ntBASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SPTSSBQ8NFR3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-7-201ENST00000364784 107 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-8-201ENST00000365467 107 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 SNORA70.4-201ENST00000365509 134 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RNU1-73P-201ENST00000383971 164 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC009310.1-201ENST00000414414 451 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC018634.1-201ENST00000437554 401 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RPL26P9-201ENST00000457466 433 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 FO393415.2-201ENST00000480085 343 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC104090.1-201ENST00000506341 1171 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 FAM206BP-201ENST00000510179 541 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RNA5SP281-201ENST00000516504 135 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-362P-201ENST00000516736 90 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 RANP3-201ENST00000530970 276 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC084033.1-201ENST00000550830 633 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC007151.1-201ENST00000572774 483 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 MIR4325-201ENST00000583049 90 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AP003973.1-201ENST00000604639 691 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 PRR13P7-201ENST00000605538 430 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 FTX_3.1-201ENST00000610451 147 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 MIR6817-201ENST00000615588 66 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC068724.3-201ENST00000625906 87 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC083865.1-201ENST00000636634 831 ntBASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTSSBQ8NFR3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AP000776.1-201ENST00000530032 1663 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-741P-201ENST00000383889 107 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-76P-201ENST00000384060 104 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 BOLA3P4-201ENST00000418151 400 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 RPL31P54-201ENST00000429803 370 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 RSL24D1P3-201ENST00000449255 495 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 HMGN2P23-201ENST00000456759 269 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 MTCO3P2-201ENST00000457365 171 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 Y_RNA.675-201ENST00000516389 149 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC104997.1-201ENST00000519761 717 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 VN1R88P-201ENST00000596787 292 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 RPP40P2-201ENST00000603596 712 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AP000238.1-201ENST00000608759 426 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC008443.7-201ENST00000622195 246 ntBASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SPTSSBQ8NFR3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU6-486P-201ENST00000363116 107 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU2-47P-201ENST00000410649 186 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU2-15P-201ENST00000410692 191 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 RNU2-63P-201ENST00000410792 194 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 AL445183.3-201ENST00000414168 502 ntBASIC0.91□□□□□ -2.26
SPTSSBQ8NFR3 ZNF863P-201ENST00000426746 417 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms