Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 DDX43P2-201ENST00000604753 1354 ntBASIC2.65□□□□□ -1.98
CCDC65Q8IXS2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC65Q8IXS2 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 RNU4-92P-201ENST00000363783 136 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 MIR514A1-201ENST00000385133 98 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 MIR524-201ENST00000385242 87 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 RPS25P9-201ENST00000435591 252 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 TAAR7P-201ENST00000436141 242 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC004854.1-201ENST00000440356 349 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 snoU13.8-201ENST00000458890 104 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 MTND1P16-201ENST00000465177 898 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC126389.1-201ENST00000477436 290 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 RPL30P5-201ENST00000494923 336 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 UBE2V1P12-201ENST00000503954 474 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC007115.1-201ENST00000546853 234 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC025281.1-201ENST00000567026 265 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 MIR3609-201ENST00000582661 80 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 BBIP1P1-201ENST00000602999 279 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC011451.2-201ENST00000604303 598 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AL136370.1-201ENST00000608166 691 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 AL603758.1-201ENST00000618654 241 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.65□□□□□ -1.99
CCDC65Q8IXS2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL136360.1-201ENST00000503377 1900 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 ZNF29P-201ENST00000225587 168 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 Y_RNA.465-201ENST00000384293 102 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1207P-201ENST00000384343 107 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC018630.2-202ENST00000422992 927 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC092648.1-201ENST00000425870 423 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC104090.1-201ENST00000506341 1171 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC109445.1-201ENST00000512356 383 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 RNA5SP24-201ENST00000516478 95 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AP003467.2-201ENST00000520175 319 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC021269.2-201ENST00000532318 330 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AMZ2P1-203ENST00000565833 850 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL645944.1-201ENST00000603857 493 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC080013.3-201ENST00000606839 578 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AL139022.2-201ENST00000606934 443 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC245297.2-201ENST00000610119 565 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 DUXAP10-204ENST00000612052 616 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC008443.7-201ENST00000622195 246 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC079597.1-201ENST00000624306 508 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 MIR203B-201ENST00000636080 86 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AC087359.1-201ENST00000508335 1740 ntBASIC2.64□□□□□ -1.99
CCDC65Q8IXS2 AP000776.1-201ENST00000530032 1663 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 RNU5A-1-201ENST00000362698 116 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 RNU6-193P-201ENST00000410977 107 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 NANOGP5-201ENST00000424456 877 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 COX7BP2-201ENST00000437976 242 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC234781.5-201ENST00000508429 271 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC112673.1-201ENST00000513168 575 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 SCARNA15.2-201ENST00000516409 127 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC027176.1-201ENST00000560204 514 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC006023.1-201ENST00000603944 259 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC026790.2-201ENST00000606282 430 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AC103810.6-201ENST00000606708 136 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 CTSLP2-204ENST00000629029 392 ntBASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC65Q8IXS2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms