Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC008498.1-201ENST00000613012 531 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC009509.4-201ENST00000619202 509 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 FAM35BP-202ENST00000497389 3337 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 OR4G2P-202ENST00000641004 1759 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 SNORA80A-201ENST00000363922 136 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 SNORA20.2-201ENST00000383922 131 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RNU6-1119P-201ENST00000384349 108 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AL359634.1-202ENST00000404721 284 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RN7SKP140-201ENST00000411196 284 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AL159169.1-201ENST00000421119 127 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 KLF3P2-201ENST00000465138 268 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC023598.1-201ENST00000472521 361 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC096576.1-201ENST00000489014 359 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RN7SKP83-201ENST00000516512 178 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RNU7-51P-201ENST00000516560 62 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 RNA5SP291-201ENST00000517222 105 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC087883.1-201ENST00000551882 391 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 MIR4293-201ENST00000584305 78 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC002545.1-201ENST00000592511 181 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 AC073648.5-201ENST00000603502 305 ntBASIC3.74□□□□□ -1.81
HERC6Q8IVU3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERC6Q8IVU3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RNU5E-1-201ENST00000362477 120 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RNU1-39P-201ENST00000383897 165 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RNU6-348P-201ENST00000384386 107 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 DEFB108C-201ENST00000400154 252 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AL513331.1-201ENST00000411908 397 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RAC1P6-201ENST00000423911 575 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 MTCO3P5-201ENST00000433620 714 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AC009237.8-201ENST00000445492 379 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RPL37P6-201ENST00000460682 294 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AC110794.1-201ENST00000505816 425 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AL121576.1-201ENST00000556055 276 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AP000860.1-201ENST00000605250 559 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AC098679.4-201ENST00000624241 654 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AL732372.2-225ENST00000642124 456 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
HERC6Q8IVU3 AC007656.2-201ENST00000624902 4547 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 HSPE1P11-201ENST00000339579 310 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 OR5H15-201ENST00000383696 930 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RNU5A-6P-201ENST00000384136 116 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RPS3AP36-201ENST00000398190 775 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL357075.1-201ENST00000404107 726 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC017079.2-201ENST00000416102 485 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 PIGFP2-201ENST00000421400 651 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC084357.1-201ENST00000473404 255 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RBM43P1-201ENST00000476891 1081 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RN7SL432P-201ENST00000484057 298 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AP003392.2-201ENST00000527269 208 ntBASIC3.72□□□□□ -1.81
HERC6Q8IVU3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms