Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AP006587.4-201ENST00000526053 529 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.13□□□□□ -1.59
USP48Q86UV5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.13□□□□□ -1.59
USP48Q86UV5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.13□□□□□ -1.59
USP48Q86UV5 SCOCP1-201ENST00000554676 349 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 AC174048.1-201ENST00000603389 144 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP48Q86UV5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.13□□□□□ -1.59
USP48Q86UV5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP48Q86UV5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP48Q86UV5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP48Q86UV5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP48Q86UV5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC000123.3-201ENST00000624029 4975 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 U3.12-201ENST00000364498 214 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 RNA5SP235-201ENST00000365411 114 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 MIR7-3-201ENST00000384898 110 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 MIR93-201ENST00000385024 80 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC097374.1-203ENST00000400783 485 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 SNORA74C-2-201ENST00000411179 201 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 RN7SKP140-201ENST00000411196 284 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AL451054.2-201ENST00000420896 202 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC091390.3-201ENST00000426478 338 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 MTATP6P4-201ENST00000427725 675 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 RPL7L1P10-201ENST00000427790 463 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 RPL21P112-201ENST00000434403 463 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC024082.2-201ENST00000434771 238 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.12□□□□□ -1.59
USP48Q86UV5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 RNU6-1208P-201ENST00000459588 107 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 Y_RNA.654-201ENST00000497848 106 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 RBBP4P6-201ENST00000508098 202 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 GMPSP1-201ENST00000514075 579 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.12□□□□□ -1.59
USP48Q86UV5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.12□□□□□ -1.59
USP48Q86UV5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 AL162730.1-201ENST00000605734 292 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AL022345.1-201ENST00000607292 135 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AC092807.2-201ENST00000609367 243 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AL121772.2-201ENST00000614331 297 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 AL021997.2-201ENST00000615674 271 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 MIR1302-1-201ENST00000637932 143 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP48Q86UV5 AC004925.1-201ENST00000624256 2706 ntBASIC5.12□□□□□ -1.59
USP48Q86UV5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
USP48Q86UV5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.12□□□□□ -1.59
USP48Q86UV5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.11□□□□□ -1.59
USP48Q86UV5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
USP48Q86UV5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
USP48Q86UV5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USP48Q86UV5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 Y_RNA.67-201ENST00000362870 100 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 RNU6-335P-201ENST00000364563 113 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 RAB9AP3-201ENST00000412737 573 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 BX323014.1-201ENST00000412876 237 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.11□□□□□ -1.59
USP48Q86UV5 RAB9AP1-201ENST00000449393 573 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 PPP1R2P5-201ENST00000457256 603 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AC004801.2-202ENST00000463559 283 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 TRBV1-201ENST00000476502 284 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 RNU6-123P-201ENST00000516163 102 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 RNA5SP154-201ENST00000516193 111 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 RNU6-1038P-201ENST00000516516 104 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 MYL12AP1-201ENST00000518490 515 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.11□□□□□ -1.59
USP48Q86UV5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.11□□□□□ -1.59
USP48Q86UV5 AL121576.1-201ENST00000556055 276 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AL118558.2-201ENST00000556294 238 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 MIR5583-1-201ENST00000580941 59 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AC067852.3-201ENST00000589177 561 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AL138889.2-201ENST00000603883 242 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AC104763.2-201ENST00000604179 382 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AL133255.1-201ENST00000606374 441 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.11□□□□□ -1.59
USP48Q86UV5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
USP48Q86UV5 AC009812.4-201ENST00000569134 1805 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USP48Q86UV5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 MAPK10-253ENST00000641010 4072 ntBASIC5.11□□□□□ -1.59
USP48Q86UV5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP48Q86UV5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP48Q86UV5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms