Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NIPAL3Q6P499 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 RNU6-884P-201ENST00000363889 107 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 RNU6-278P-201ENST00000390945 109 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 MIR888-201ENST00000401186 77 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 FO393413.1-201ENST00000402892 195 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 RPL35AP12-201ENST00000425362 338 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 YWHAZP7-201ENST00000436906 631 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC013267.1-201ENST00000458227 267 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SNORD11.1-201ENST00000459482 85 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 MRPS17P3-201ENST00000465453 385 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 RPL23AP11-201ENST00000475260 469 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SEM1P1-201ENST00000506694 209 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 MTATP6P15-201ENST00000527233 835 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC087276.1-201ENST00000529659 480 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC007536.1-201ENST00000533382 349 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC022080.3-201ENST00000544433 482 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC015871.2-201ENST00000603605 948 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AL137843.1-201ENST00000605078 385 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC091965.4-201ENST00000607691 587 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 SNHG22-203ENST00000617833 660 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC012150.2-201ENST00000621300 544 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 AC091965.5-201ENST00000624785 342 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 CR848007.1-201ENST00000442354 1699 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 CCT4P2-201ENST00000233836 1548 ntBASIC2.62□□□□□ -1.99
NIPAL3Q6P499 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NIPAL3Q6P499 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 Y_RNA.18-201ENST00000362461 102 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 Y_RNA.245-201ENST00000364493 95 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 RNU6-1180P-201ENST00000364935 107 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 SNORA48.5-201ENST00000391143 135 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 MIR887-201ENST00000401258 79 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 VPS26BP1-201ENST00000417155 755 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 USP9YP13-201ENST00000417797 480 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC098614.2-201ENST00000426040 255 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC244035.1-201ENST00000430042 390 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 RPL7P36-201ENST00000444633 681 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 RPL37P6-201ENST00000460682 294 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 RPL36AP51-201ENST00000487216 318 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC055855.1-201ENST00000489563 579 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 MRPS36P2-201ENST00000512569 299 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC022634.1-201ENST00000520765 532 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AL354943.1-201ENST00000572103 781 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC021171.1-201ENST00000603137 706 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 BCRP9-201ENST00000605312 388 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 AC091953.5-201ENST00000622919 233 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 MIR6733-201ENST00000635723 61 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.61□□□□□ -1.99
NIPAL3Q6P499 MTND4P16-201ENST00000466108 1367 ntBASIC2.61□□□□□ -1.99
NIPAL3Q6P499 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 RNU1-140P-201ENST00000365040 165 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC005094.1-201ENST00000440420 368 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 RPL23AP41-201ENST00000484754 458 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC113155.1-201ENST00000511141 769 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC100870.1-201ENST00000522035 505 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AGGF1P5-201ENST00000567900 919 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms