Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC026801.2-201ENST00000515352 425 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 MTND2P32-201ENST00000521584 1038 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC105137.2-201ENST00000569073 466 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL035413.2-201ENST00000604801 525 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL592221.1-201ENST00000605266 382 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC103810.6-201ENST00000606708 136 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC090132.2-201ENST00000615881 347 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL391262.2-201ENST00000622466 494 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATL3Q6DD88 AL161781.1-201ENST00000354277 403 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 RNU6-7-201ENST00000364784 107 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 RNU6-8-201ENST00000365467 107 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 RNA5SP184-201ENST00000411071 108 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 Z92545.1-201ENST00000411782 234 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 SSR1P2-201ENST00000415208 787 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 FGF7P5-201ENST00000441829 291 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 MTCO1P27-201ENST00000448269 226 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 HMGB1P36-201ENST00000487709 576 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 MTCO1P47-201ENST00000523889 1271 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 AC124947.2-202ENST00000552735 133 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 MIR5007-201ENST00000583098 95 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 AL033523.1-201ENST00000605153 153 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 AC112220.3-201ENST00000605502 502 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.7□□□□□ -1.98
ATL3Q6DD88 AC110079.1-202ENST00000635213 138 ntBASIC2.7□□□□□ -1.98
ATL3Q6DD88 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNU5E-8P-201ENST00000363502 116 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNU6-777P-201ENST00000364265 104 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 SNORA36C-201ENST00000384289 132 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNU6-83P-201ENST00000384568 112 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 RN7SKP140-201ENST00000411196 284 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 PIGPP2-201ENST00000411569 458 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AF274854.1-201ENST00000413236 615 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC018630.2-202ENST00000422992 927 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL365496.1-201ENST00000426885 215 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 ARPC3P1-201ENST00000437218 533 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 RPS3P1-201ENST00000456781 192 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 RNU7-23P-201ENST00000459465 62 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 MEMO1P3-201ENST00000459811 302 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 BBIP1P1-201ENST00000602999 279 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL596327.1-201ENST00000603629 213 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL136363.1-201ENST00000605349 337 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC005000.2-201ENST00000605468 310 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL158211.4-201ENST00000606988 584 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC097478.2-201ENST00000610572 514 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
ATL3Q6DD88 OR5H6-203ENST00000642105 978 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL049641.1-201ENST00000441055 1948 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC135776.4-201ENST00000624300 1904 ntBASIC2.69□□□□□ -1.98
ATL3Q6DD88 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATL3Q6DD88 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ATL3Q6DD88 GNG5P1-201ENST00000255500 204 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATL3Q6DD88 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 RNU6-1207P-201ENST00000384343 107 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 MIR514A1-201ENST00000385133 98 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 NDUFB4P4-201ENST00000404822 243 ntBASIC2.68□□□□□ -1.98
ATL3Q6DD88 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ATL3Q6DD88 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.68□□□□□ -1.98
ATL3Q6DD88 Z85995.1-201ENST00000415547 335 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms