Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42BPAQ5VT25 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 POLR2J4-204ENST00000418424 324 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 RPL30P4-201ENST00000429309 333 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 MTND4LP16-201ENST00000440828 295 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 DEFB108E-201ENST00000524692 240 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 SNORD39.2-201ENST00000579995 76 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 AC012443.1-201ENST00000605605 231 ntBASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42BPAQ5VT25 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 TRIM60P13-201ENST00000432350 1283 ntBASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 AC096751.1-202ENST00000502691 1067 ntBASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 AC011712.1-201ENST00000588959 234 ntBASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 MIR6857-201ENST00000613267 93 ntBASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.4□□□□□ -2.18
CDC42BPAQ5VT25 AC079780.1-201ENST00000428259 207 ntBASIC1.4□□□□□ -2.19
CDC42BPAQ5VT25 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42BPAQ5VT25 U73023.1-201ENST00000603134 700 ntBASIC1.4□□□□□ -2.19
CDC42BPAQ5VT25 AC126118.1-201ENST00000607744 628 ntBASIC1.4□□□□□ -2.19
CDC42BPAQ5VT25 AC010889.1-201ENST00000566193 2666 ntBASIC1.4□□□□□ -2.19
CDC42BPAQ5VT25 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 RNA5SP354-201ENST00000391247 136 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 RNA5SP450-201ENST00000411206 102 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AC092648.1-201ENST00000425870 423 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AC118469.1-201ENST00000442943 488 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 MRPS33P3-201ENST00000513456 322 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 AC006065.5-201ENST00000623427 349 ntBASIC1.39□□□□□ -2.19
CDC42BPAQ5VT25 RNU6-1181P-201ENST00000384191 106 ntBASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 KATNBL1P4-201ENST00000503545 918 ntBASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 RN7SKP179-201ENST00000516126 217 ntBASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 AC005730.3-201ENST00000583067 366 ntBASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CDC42BPAQ5VT25 AC073464.3-201ENST00000422564 712 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 MTND2P2-201ENST00000434633 945 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 MTND2P29-201ENST00000438595 412 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 CASP3P1-201ENST00000446037 609 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 AC008269.2-201ENST00000561915 1105 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 AL355297.2-201ENST00000604792 129 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 TPMTP3-201ENST00000411928 735 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 RPS29P28-201ENST00000446439 141 ntBASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.37□□□□□ -2.19
CDC42BPAQ5VT25 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 DDX43P2-201ENST00000604753 1354 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 CCNB2P1-201ENST00000399411 1150 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC093155.1-201ENST00000440164 826 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC005410.1-202ENST00000460347 485 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC025768.1-201ENST00000510057 267 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 RN7SKP34-201ENST00000516142 244 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC112191.3-201ENST00000604371 277 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AL020996.3-201ENST00000606617 222 ntBASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.36□□□□□ -2.19
CDC42BPAQ5VT25 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC004022.2-201ENST00000413824 193 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 RPL21P90-201ENST00000415692 466 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL500527.1-201ENST00000448532 255 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL121769.1-201ENST00000469473 401 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC023825.1-201ENST00000566704 1030 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL512605.2-201ENST00000592972 256 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AL627230.6-201ENST00000611129 280 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC109809.1-201ENST00000619665 545 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 OR6C66P-201ENST00000414917 930 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 THAP5P1-201ENST00000439089 262 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC021382.1-201ENST00000483523 359 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC026801.1-201ENST00000497178 464 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 MTND3P24-201ENST00000506306 329 ntBASIC1.35□□□□□ -2.19
CDC42BPAQ5VT25 AC244033.1-201ENST00000426826 870 ntBASIC1.34□□□□□ -2.2
CDC42BPAQ5VT25 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.34□□□□□ -2.2
CDC42BPAQ5VT25 AC107214.2-201ENST00000608204 634 ntBASIC1.34□□□□□ -2.2
CDC42BPAQ5VT25 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 Y_RNA.205-201ENST00000364128 113 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 SNORA14A-201ENST00000364773 135 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 AC010099.1-201ENST00000455434 375 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 AC090525.3-201ENST00000605601 189 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 RNA5SP108-201ENST00000605921 117 ntBASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.33□□□□□ -2.2
CDC42BPAQ5VT25 SNORD14B-201ENST00000364533 90 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms