Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.71□□□□□ -2.29
VPS13DQ5THJ4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 SNORD23.1-201ENST00000408212 104 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 Z85994.2-201ENST00000434327 452 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AL121601.2-201ENST00000438019 707 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AL035407.2-201ENST00000454090 378 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC103810.8-201ENST00000607347 118 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 SNORA62.1-201ENST00000364287 154 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 RPL31P2-201ENST00000413849 377 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC022447.3-201ENST00000506865 495 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 RNA5SP108-201ENST00000605921 117 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC106052.1-201ENST00000608029 497 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC021755.4-201ENST00000616620 456 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 SNORD14B-201ENST00000364533 90 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 MIR216A-201ENST00000385063 110 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 PMCHL2-203ENST00000457791 237 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 RPL30P12-201ENST00000474666 353 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC093852.1-201ENST00000503587 266 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC025768.1-201ENST00000510057 267 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 MRPS17P9-201ENST00000511924 393 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 AC233266.2-201ENST00000567067 528 ntBASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
VPS13DQ5THJ4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 RNA5SP457-201ENST00000363657 124 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 PRELID3BP11-201ENST00000414230 479 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 RPL21P90-201ENST00000415692 466 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC005410.1-202ENST00000460347 485 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 MTND3P24-201ENST00000506306 329 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AL138976.2-201ENST00000563989 694 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 RNU11-5P-201ENST00000391216 129 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 CR383656.8-201ENST00000549046 145 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC090517.3-201ENST00000625170 141 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 RNA5SP354-201ENST00000391247 136 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 SNRPFP3-201ENST00000457792 225 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC010285.1-201ENST00000470580 392 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 RPS27P21-201ENST00000486977 252 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC104685.1-201ENST00000502445 371 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC009127.3-201ENST00000570531 403 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AL135786.2-201ENST00000608422 615 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 AC091304.6-201ENST00000619761 202 ntBASIC0.7□□□□□ -2.3
VPS13DQ5THJ4 MTND4P27-201ENST00000450813 1354 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AC007560.1-201ENST00000426912 237 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AP004247.1-201ENST00000531556 1289 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 NBEAP1-201ENST00000554452 979 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AL442644.1-201ENST00000454390 3105 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 HMGN2P30-201ENST00000423237 256 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 ARF4P4-201ENST00000439608 520 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AC118469.1-201ENST00000442943 488 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 HSPE1P22-201ENST00000456856 327 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 AC010487.4-201ENST00000637027 61 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 TEX21P-201ENST00000447107 1476 ntBASIC0.69□□□□□ -2.3
VPS13DQ5THJ4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC005534.2-201ENST00000431047 433 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL161713.1-201ENST00000555538 145 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 RBBP8P1-201ENST00000449447 1844 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 SNORA70.7-201ENST00000384159 133 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC018630.2-202ENST00000422992 927 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL445305.1-201ENST00000432577 575 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 MTCO3P24-201ENST00000572729 782 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 SNORD114-21-201ENST00000606412 72 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 RNU4-65P-201ENST00000410473 140 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 RNU2-41P-201ENST00000410991 178 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms