Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 RN7SL504P-201ENST00000494496 287 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC118273.2-201ENST00000532092 465 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AP003034.1-201ENST00000534621 422 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 AL157687.1-201ENST00000554853 619 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 SUB1P2-201ENST00000556401 297 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 MIR5680-201ENST00000577577 84 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC012507.3-201ENST00000603556 477 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AP000907.4-201ENST00000604143 237 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AL034351.1-201ENST00000605288 668 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC103710.3-201ENST00000608157 948 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC017083.3-201ENST00000609955 700 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 AP003355.3-201ENST00000623465 114 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 AC112204.3-201ENST00000623822 332 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC93Q567U6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.36□□□□□ -1.71
CCDC93Q567U6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC93Q567U6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC93Q567U6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC93Q567U6 RNU6-1085P-201ENST00000363576 107 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 Y_RNA.390-201ENST00000383932 102 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 USP9YP6-201ENST00000413550 854 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 RPS15AP12-201ENST00000419498 388 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC007283.2-201ENST00000424739 197 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 FTH1P1-201ENST00000437933 532 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AL671855.1-201ENST00000446875 1203 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 FTH1P25-201ENST00000447665 469 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 NFU1P2-201ENST00000448700 469 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 MTND1P9-201ENST00000453775 944 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 ST13P14-201ENST00000474095 734 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 FCF1P3-201ENST00000496394 590 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC017037.2-201ENST00000513850 890 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 RNA5SP468-201ENST00000516782 93 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 SUMO2P20-201ENST00000520803 283 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC109635.3-201ENST00000529536 185 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AL512310.1-201ENST00000548639 172 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC011451.2-201ENST00000604303 598 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 AC139792.3-201ENST00000623525 224 ntBASIC4.35□□□□□ -1.71
CCDC93Q567U6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC93Q567U6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC93Q567U6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC93Q567U6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC93Q567U6 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC93Q567U6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 RNA5SP295-201ENST00000362655 121 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 RNU6-1090P-201ENST00000364065 94 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 HLFP1-201ENST00000402375 499 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 ELOCP4-201ENST00000420090 333 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC099677.1-201ENST00000420575 175 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 TIMM9P1-201ENST00000436122 256 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL662791.1-201ENST00000441992 928 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 RAC1P7-201ENST00000445367 377 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 snoU13.4-201ENST00000458916 104 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 RPL23AP62-201ENST00000463396 453 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 HMGB1P25-201ENST00000468402 607 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC078785.3-201ENST00000476607 425 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC079382.1-201ENST00000493346 557 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC93Q567U6 Y_RNA.693-201ENST00000516641 110 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 RNA5SP337-201ENST00000517007 109 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms