| ZIC1 | Q15915 | AL589684.1-201 | ENST00000445974 | 507 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | ZNF114P1-201 | ENST00000453500 | 292 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | CHRM3-AS2-203 | ENST00000458325 | 895 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RN7SL283P-201 | ENST00000489055 | 303 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RPS15AP36-201 | ENST00000492022 | 382 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC010486.2-201 | ENST00000505572 | 483 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC119751.5-201 | ENST00000514077 | 770 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC116347.2-201 | ENST00000514912 | 523 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNU6-840P-201 | ENST00000517275 | 65 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | CASP1P1-201 | ENST00000526345 | 212 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | CCDC7-208 | ENST00000537047 | 657 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | CCDC7-209 | ENST00000539197 | 581 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL358333.2-201 | ENST00000556834 | 529 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | MTND3P12-201 | ENST00000559068 | 328 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | PCMTD1P2-201 | ENST00000565017 | 355 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC091489.2-201 | ENST00000566263 | 604 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC005951.2-201 | ENST00000576282 | 495 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC135178.3-204 | ENST00000585181 | 451 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC080078.1-201 | ENST00000603643 | 410 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC122133.1-201 | ENST00000613964 | 233 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC004696.1-201 | ENST00000614345 | 607 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RICTOR-201 | ENST00000296782 | 7505 nt | TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | HERC5-203 | ENST00000508159 | 2243 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | SPEF2-203 | ENST00000440995 | 5964 nt | APPRIS ALT2 TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | ATF2-204 | ENST00000409437 | 3697 nt | TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | DNAH12-208 | ENST00000495027 | 12146 nt | APPRIS P1 TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | OR5T2-201 | ENST00000313264 | 1248 nt | APPRIS P2 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | OR6C70-201 | ENST00000327335 | 939 nt | APPRIS P1 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNU6-223P-201 | ENST00000362830 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | Y_RNA.111-201 | ENST00000363248 | 100 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | Y_RNA.169-201 | ENST00000363745 | 96 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | SNORA5B-201 | ENST00000363786 | 132 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNU1-112P-201 | ENST00000364401 | 164 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | SNORA51.4-201 | ENST00000364993 | 124 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | Y_RNA.560-201 | ENST00000384689 | 102 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | MIR181A2-201 | ENST00000384863 | 110 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | HIST1H2APS3-201 | ENST00000403259 | 134 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNU6-920P-201 | ENST00000410926 | 92 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC078974.1-201 | ENST00000411597 | 223 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | B3GALNT1P1-201 | ENST00000420569 | 975 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC104653.1-201 | ENST00000420579 | 578 nt | TSL 2 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | USP9YP26-201 | ENST00000421008 | 661 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | USP9YP36-201 | ENST00000424581 | 829 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC017074.1-201 | ENST00000424612 | 561 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RPL7L1P10-201 | ENST00000427790 | 463 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL356867.1-201 | ENST00000429623 | 299 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | OR2B8P-201 | ENST00000432841 | 938 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC087499.2-201 | ENST00000432861 | 149 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RAB6C-AS1-202 | ENST00000433431 | 123 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC092573.2-201 | ENST00000434546 | 243 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL158828.1-201 | ENST00000438582 | 197 nt | TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC009969.1-201 | ENST00000438726 | 172 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL512286.1-201 | ENST00000439244 | 400 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC007879.4-201 | ENST00000440545 | 361 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | TRIM60P18-201 | ENST00000441518 | 828 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC018643.1-201 | ENST00000445459 | 414 nt | TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL158210.1-201 | ENST00000448835 | 500 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AF127577.5-201 | ENST00000449746 | 446 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | MTND2P24-201 | ENST00000453434 | 806 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL359095.1-201 | ENST00000457383 | 635 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | NDUFA6-201 | ENST00000470753 | 475 nt | TSL 2 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | CSN1S1-202 | ENST00000505782 | 871 nt | APPRIS ALT2 TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC010261.1-201 | ENST00000514411 | 457 nt | TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | RNA5SP356-201 | ENST00000515972 | 94 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | SCARNA15.2-201 | ENST00000516409 | 127 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | SNORA31.26-201 | ENST00000517250 | 137 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AP000907.2-201 | ENST00000530827 | 353 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AP000857.1-201 | ENST00000532151 | 543 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | HPRT1P3-201 | ENST00000539521 | 576 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC011611.4-201 | ENST00000547721 | 779 nt | TSL 2 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC069228.1-202 | ENST00000550272 | 737 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | TIMM9-208 | ENST00000556007 | 746 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | LINC02311-202 | ENST00000556819 | 477 nt | TSL 3 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL133153.1-201 | ENST00000557756 | 303 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC135628.1-201 | ENST00000568867 | 534 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC069114.1-201 | ENST00000580927 | 287 nt | TSL 2 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | ELOCP29-201 | ENST00000588193 | 334 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC098848.1-201 | ENST00000588466 | 567 nt | TSL 4 BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | TPMTP1-201 | ENST00000592307 | 737 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | WISP1-OT1-201 | ENST00000602893 | 642 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC068790.3-201 | ENST00000602988 | 553 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC013553.2-201 | ENST00000604244 | 589 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | ATP1B3P1-201 | ENST00000605365 | 821 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC007038.2-201 | ENST00000608095 | 740 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC004908.2-201 | ENST00000609090 | 574 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL355472.4-201 | ENST00000610233 | 626 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | MIR6076-201 | ENST00000617521 | 113 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL603755.1-201 | ENST00000619504 | 163 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC097520.1-201 | ENST00000624435 | 385 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AC019226.2-201 | ENST00000625973 | 424 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | AL445523.1-201 | ENST00000451184 | 1362 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | IL6ST-205 | ENST00000381294 | 2574 nt | TSL 1 (best) BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | LINC01111-201 | ENST00000518732 | 1663 nt | TSL 1 (best) BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | ANKRD36BP1-201 | ENST00000358576 | 1779 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | LINC01419-201 | ENST00000522365 | 1521 nt | TSL 1 (best) BASIC | 2.68 | □□□□□ -1.98 | | |
| ZIC1 | Q15915 | FKTN-204 | ENST00000448551 | 1700 nt | TSL 2 BASIC | 2.68 | □□□□□ -1.98 | | |