Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC106791.2-201ENST00000604680 391 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC090970.3-201ENST00000612566 866 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CACNA1EQ15878 RNA5SP62-201ENST00000363457 110 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 RNU1-52P-201ENST00000384190 164 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 AL138880.1-201ENST00000405824 642 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 RPL30P14-201ENST00000482744 348 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC092451.2-201ENST00000538746 658 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC023825.1-201ENST00000566704 1030 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 AC130650.2-201ENST00000618736 2403 ntBASIC1.16□□□□□ -2.22
CACNA1EQ15878 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CACNA1EQ15878 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CACNA1EQ15878 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 Y_RNA.62-201ENST00000362840 99 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CACNA1EQ15878 RPL23AP33-201ENST00000442301 452 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CACNA1EQ15878 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC008739.2-201ENST00000597006 317 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC123912.5-201ENST00000605470 343 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC103810.8-201ENST00000607347 118 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AL590282.1-201ENST00000610379 1136 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC020923.1-201ENST00000624021 917 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 RNA5SP139-201ENST00000364340 117 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 RNU6-335P-201ENST00000364563 113 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 SNORA6-201ENST00000384033 151 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC108059.3-201ENST00000456388 214 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 RPL30P11-201ENST00000495304 339 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 MTCYBP41-201ENST00000528913 1123 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.15□□□□□ -2.23
CACNA1EQ15878 AL031601.2-202ENST00000622650 282 ntBASIC1.15□□□□□ -2.23
CACNA1EQ15878 RNU4-91P-201ENST00000364778 135 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 VN1R108P-201ENST00000431580 830 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC108078.1-201ENST00000508073 725 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 MTCO1P47-201ENST00000523889 1271 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 SETP7-201ENST00000552169 453 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 7SK.7-201ENST00000603504 247 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC139769.3-201ENST00000618383 175 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1EQ15878 TEX21P-201ENST00000447107 1476 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1EQ15878 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 RNA5SP252-201ENST00000391131 119 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AL358176.2-201ENST00000425769 204 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AL136380.1-201ENST00000447970 162 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 RNU7-27P-201ENST00000459281 62 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1EQ15878 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC110079.1-202ENST00000635213 138 ntBASIC1.14□□□□□ -2.23
CACNA1EQ15878 AC025263.3-201ENST00000622965 1396 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CACNA1EQ15878 AL359851.1-201ENST00000569460 4997 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 Y_RNA.274-201ENST00000364714 101 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 SNORD23.1-201ENST00000408212 104 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 AL030996.1-201ENST00000411430 235 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.13□□□□□ -2.23
CACNA1EQ15878 AC010285.1-201ENST00000470580 392 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 RPL23AP41-201ENST00000484754 458 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 AC113155.1-201ENST00000511141 769 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 RNA5SP121-201ENST00000516537 101 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 MIR514B-201ENST00000516774 80 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 AC069304.3-201ENST00000603938 1084 ntBASIC1.13□□□□□ -2.23
CACNA1EQ15878 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.13□□□□□ -2.23
CACNA1EQ15878 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms