Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USF2Q15853 RNU5B-1-201ENST00000363286 116 ntBASIC2.03□□□□□ -2.08
USF2Q15853 RNU6-637P-201ENST00000384050 107 ntBASIC2.03□□□□□ -2.08
USF2Q15853 SNORA51.11-201ENST00000384442 131 ntBASIC2.03□□□□□ -2.08
USF2Q15853 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USF2Q15853 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
USF2Q15853 RPS4XP8-201ENST00000402039 771 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.03□□□□□ -2.08
USF2Q15853 AC003685.2-201ENST00000422795 395 ntBASIC2.03□□□□□ -2.08
USF2Q15853 BX276092.3-201ENST00000424182 230 ntBASIC2.03□□□□□ -2.08
USF2Q15853 FO393414.1-201ENST00000428697 1184 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC107083.1-201ENST00000439643 279 ntBASIC2.03□□□□□ -2.08
USF2Q15853 RPS24P13-201ENST00000442520 397 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AL049873.1-201ENST00000480540 376 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.03□□□□□ -2.08
USF2Q15853 LTV1P1-201ENST00000510683 1237 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.03□□□□□ -2.08
USF2Q15853 SNORA31.25-201ENST00000517242 134 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC123904.3-201ENST00000547218 814 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.03□□□□□ -2.08
USF2Q15853 CYCSP2-201ENST00000558168 301 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.03□□□□□ -2.08
USF2Q15853 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.03□□□□□ -2.08
USF2Q15853 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
USF2Q15853 MIR5092-201ENST00000583139 88 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC008749.1-201ENST00000597650 306 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AL138478.1-201ENST00000612252 832 ntBASIC2.03□□□□□ -2.08
USF2Q15853 AC005332.6-201ENST00000613178 446 ntBASIC2.03□□□□□ -2.08
USF2Q15853 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
USF2Q15853 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.03□□□□□ -2.08
USF2Q15853 AL138713.1-201ENST00000624026 2130 ntBASIC2.03□□□□□ -2.08
USF2Q15853 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
USF2Q15853 RNU1-100P-201ENST00000365255 165 ntBASIC2.02□□□□□ -2.09
USF2Q15853 U8.8-201ENST00000365399 135 ntBASIC2.02□□□□□ -2.09
USF2Q15853 RNU6-354P-201ENST00000383862 107 ntBASIC2.02□□□□□ -2.09
USF2Q15853 RNU6-610P-201ENST00000384264 107 ntBASIC2.02□□□□□ -2.09
USF2Q15853 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USF2Q15853 SNORD65.1-201ENST00000390889 71 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AL356057.3-201ENST00000402607 340 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.02□□□□□ -2.09
USF2Q15853 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
USF2Q15853 Z98742.2-201ENST00000431564 187 ntBASIC2.02□□□□□ -2.09
USF2Q15853 FABP5P14-201ENST00000437273 393 ntBASIC2.02□□□□□ -2.09
USF2Q15853 USP9YP22-201ENST00000438971 294 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USF2Q15853 PMCHL2-203ENST00000457791 237 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.02□□□□□ -2.09
USF2Q15853 AC080013.2-201ENST00000460866 323 ntBASIC2.02□□□□□ -2.09
USF2Q15853 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.02□□□□□ -2.09
USF2Q15853 HMGB1P36-201ENST00000487709 576 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC022493.1-201ENST00000492984 337 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC069306.1-201ENST00000507006 843 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.02□□□□□ -2.09
USF2Q15853 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.02□□□□□ -2.09
USF2Q15853 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.02□□□□□ -2.09
USF2Q15853 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
USF2Q15853 RNA5SP290-201ENST00000517133 127 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.02□□□□□ -2.09
USF2Q15853 AC026616.1-201ENST00000523157 525 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC118273.2-201ENST00000532092 465 ntBASIC2.02□□□□□ -2.09
USF2Q15853 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USF2Q15853 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.02□□□□□ -2.09
USF2Q15853 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.02□□□□□ -2.09
USF2Q15853 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
USF2Q15853 AL357094.1-201ENST00000603845 844 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC243773.3-201ENST00000613270 256 ntBASIC2.02□□□□□ -2.09
USF2Q15853 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.02□□□□□ -2.09
USF2Q15853 AC010133.1-201ENST00000615809 842 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AL157770.1-201ENST00000623049 439 ntBASIC2.02□□□□□ -2.09
USF2Q15853 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USF2Q15853 AC007490.1-201ENST00000624321 703 ntBASIC2.02□□□□□ -2.09
USF2Q15853 AC120349.2-201ENST00000625002 298 ntBASIC2.02□□□□□ -2.09
USF2Q15853 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USF2Q15853 AC004944.1-201ENST00000517807 3059 ntBASIC2.02□□□□□ -2.09
USF2Q15853 MTND5P30-201ENST00000452896 1731 ntBASIC2.02□□□□□ -2.09
USF2Q15853 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USF2Q15853 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USF2Q15853 SNORA5B-201ENST00000363786 132 ntBASIC2.01□□□□□ -2.09
USF2Q15853 SNORA80A-201ENST00000363922 136 ntBASIC2.01□□□□□ -2.09
USF2Q15853 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.01□□□□□ -2.09
USF2Q15853 U3.37-201ENST00000408528 213 ntBASIC2.01□□□□□ -2.09
USF2Q15853 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USF2Q15853 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USF2Q15853 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
USF2Q15853 MTCYBP38-201ENST00000417160 1123 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AL451054.2-201ENST00000420896 202 ntBASIC2.01□□□□□ -2.09
USF2Q15853 BX119904.4-201ENST00000424402 301 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.01□□□□□ -2.09
USF2Q15853 ZYG11AP1-201ENST00000430329 837 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AC098831.1-201ENST00000440661 216 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AC011816.1-201ENST00000441346 546 ntBASIC2.01□□□□□ -2.09
USF2Q15853 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.01□□□□□ -2.09
USF2Q15853 AL353718.1-201ENST00000451028 517 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.01□□□□□ -2.09
USF2Q15853 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
USF2Q15853 TRBV1-201ENST00000476502 284 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AC096576.1-201ENST00000489014 359 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AL160314.1-201ENST00000490836 438 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AC114981.1-201ENST00000503897 678 ntBASIC2.01□□□□□ -2.09
USF2Q15853 AC034159.1-201ENST00000513885 583 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms