Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AL356131.1-201ENST00000405826 414 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 MIR1284-201ENST00000408337 120 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 RN7SKP284-201ENST00000411002 343 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 SSR1P2-201ENST00000415208 787 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 MTATP6P27-201ENST00000416987 621 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 BX119904.4-201ENST00000424402 301 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC002381.1-201ENST00000447049 280 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 MTND1P31-201ENST00000449206 961 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC109464.2-201ENST00000510242 943 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 RNU6-150P-201ENST00000516237 95 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 MTND2P32-201ENST00000521584 1038 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC012443.1-201ENST00000605605 231 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC080013.4-201ENST00000607624 649 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC106028.5-201ENST00000610332 395 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC231657.1-201ENST00000624313 397 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC009812.4-201ENST00000569134 1805 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 AL079343.1-201ENST00000572358 1771 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.51□□□□□ -2.01
SMARCB1Q12824 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCB1Q12824 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCB1Q12824 AC099786.3-201ENST00000565735 1410 ntBASIC2.51□□□□□ -2.01
SMARCB1Q12824 Y_RNA.234-201ENST00000364409 97 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 RNU6-83P-201ENST00000384568 112 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 RPS3AP24-201ENST00000407896 734 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 SNORA3.2-201ENST00000408221 125 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 RNU6-584P-201ENST00000410350 95 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL953862.1-201ENST00000423016 168 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 OOSP1P1-201ENST00000423265 274 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 MTND5P14-201ENST00000441481 1267 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 RBM43P1-201ENST00000476891 1081 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCB1Q12824 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC010587.2-201ENST00000511727 448 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC109445.1-201ENST00000512356 383 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 IGLV3-17-201ENST00000519099 244 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AGGF1P5-201ENST00000567900 919 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC105137.2-201ENST00000569073 466 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 U73023.1-201ENST00000603134 700 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 DUXAP11-201ENST00000603858 526 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC046143.2-201ENST00000609789 160 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC245297.2-201ENST00000610119 565 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AL050303.3-201ENST00000613704 284 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 AC013470.4-201ENST00000619978 986 ntBASIC2.5□□□□□ -2.01
SMARCB1Q12824 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCB1Q12824 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCB1Q12824 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMARCB1Q12824 MIR513B-201ENST00000385136 84 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 MTCYBP38-201ENST00000417160 1123 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 AC004866.2-201ENST00000438285 481 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 SDCBPP1-201ENST00000440192 890 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 AL359385.1-201ENST00000456509 365 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 SNORA70.16-201ENST00000516390 95 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 MTCO1P47-201ENST00000523889 1271 ntBASIC2.49□□□□□ -2.01
SMARCB1Q12824 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCB1Q12824 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms