Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL34P20-201ENST00000442771 351 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AL359073.1-201ENST00000448036 403 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 HMGN2P13-201ENST00000476476 274 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RPS18P6-201ENST00000476880 458 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH1Q08174 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AC022493.1-201ENST00000492984 337 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RN7SL244P-201ENST00000493405 297 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH1Q08174 RNU1-86P-201ENST00000516108 154 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RNU6-397P-201ENST00000516226 104 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RNU1-107P-201ENST00000516617 154 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RN7SKP40-201ENST00000517211 242 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH1Q08174 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC107918.3-201ENST00000533272 382 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH1Q08174 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDH1Q08174 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AL390123.1-201ENST00000603216 237 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AL121917.1-203ENST00000605534 577 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC130454.1-201ENST00000622948 401 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AC090971.4-201ENST00000560291 1800 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AC009812.4-201ENST00000569134 1805 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PCDH1Q08174 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH1Q08174 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH1Q08174 AP000542.2-201ENST00000623199 6179 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDH1Q08174 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 C4BPAP1-201ENST00000415474 1893 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-398P-201ENST00000384143 109 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 Y_RNA.518-201ENST00000384552 113 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 Y_RNA.533-201ENST00000384596 114 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-1093P-201ENST00000391194 107 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 DPPA2P3-201ENST00000411853 655 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AL513331.1-201ENST00000411908 397 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 MTCO3P19-201ENST00000415864 321 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 USP9YP7-201ENST00000436723 430 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 USP9YP32-201ENST00000452432 430 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 MTND4LP30-201ENST00000454092 297 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-1037P-201ENST00000459571 107 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDH1Q08174 AC087588.1-201ENST00000462203 316 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RN7SL97P-201ENST00000486780 299 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDH1Q08174 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDH1Q08174 MIR892C-201ENST00000516410 77 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-143P-201ENST00000516942 93 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-897P-201ENST00000517135 105 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RNU6-1315P-201ENST00000517187 99 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AL121603.1-201ENST00000553815 142 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 RPS29P30-201ENST00000600975 111 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AL158827.2-201ENST00000602494 330 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AC064801.1-201ENST00000612025 407 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 MIR6719-201ENST00000622428 87 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDH1Q08174 AL691447.3-201ENST00000635020 330 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDH1Q08174 MAPK10-304ENST00000641341 3984 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 MTND5P6-201ENST00000422338 1798 ntBASIC4.8□□□□□ -1.64
PCDH1Q08174 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDH1Q08174 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDH1Q08174 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PCDH1Q08174 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
PCDH1Q08174 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDH1Q08174 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDH1Q08174 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDH1Q08174 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDH1Q08174 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDH1Q08174 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDH1Q08174 RPL23P2-201ENST00000320371 421 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDH1Q08174 RNU6-1062P-201ENST00000383908 107 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 RNU6-356P-201ENST00000384140 107 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 SNORA66-201ENST00000384792 133 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 MIR301A-201ENST00000385261 86 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDH1Q08174 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDH1Q08174 AC073587.1-201ENST00000447093 876 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 AL590664.1-201ENST00000448065 339 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 HSPE1P6-201ENST00000479457 291 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 AC110792.1-201ENST00000491826 472 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDH1Q08174 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDH1Q08174 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
PCDH1Q08174 TRAV37-201ENST00000553906 342 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms