Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 U8.14-201ENST00000390843 143 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 CISD1P1-201ENST00000393907 327 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 HMGN1P14-201ENST00000412459 517 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC118469.1-201ENST00000442943 488 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 KATNBL1P3-201ENST00000443475 909 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC087879.1-201ENST00000474343 374 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 RPS15AP34-201ENST00000487776 387 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 SNORA31.16-201ENST00000516773 139 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.95□□□□□ -2.26
TFF3Q07654 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.95□□□□□ -2.26
TFF3Q07654 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.95□□□□□ -2.26
TFF3Q07654 MIR4285-201ENST00000581001 85 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC0.95□□□□□ -2.26
TFF3Q07654 AC005296.1-201ENST00000616145 209 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC092140.2-201ENST00000618027 521 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 AC097655.1-201ENST00000635075 318 ntBASIC0.95□□□□□ -2.26
TFF3Q07654 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.95□□□□□ -2.26
TFF3Q07654 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TFF3Q07654 RNU1-148P-201ENST00000384472 162 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 MIR598-201ENST00000384868 97 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 CIR1P3-201ENST00000405137 479 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 RNA5SP450-201ENST00000411206 102 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.94□□□□□ -2.26
TFF3Q07654 UBE2V1P6-201ENST00000430840 422 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.94□□□□□ -2.26
TFF3Q07654 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.94□□□□□ -2.26
TFF3Q07654 SNRPFP3-201ENST00000457792 225 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 PABPC1P3-201ENST00000469174 459 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 AC087884.1-201ENST00000469738 328 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TFF3Q07654 AC098862.1-201ENST00000504991 413 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 AC022447.3-201ENST00000506865 495 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 RN7SKP49-201ENST00000516675 260 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.94□□□□□ -2.26
TFF3Q07654 AC022662.1-201ENST00000580252 331 ntBASIC0.94□□□□□ -2.26
TFF3Q07654 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.94□□□□□ -2.26
TFF3Q07654 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
TFF3Q07654 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TFF3Q07654 SGO1P2-201ENST00000429458 1589 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TFF3Q07654 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.93□□□□□ -2.26
TFF3Q07654 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.93□□□□□ -2.26
TFF3Q07654 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.93□□□□□ -2.26
TFF3Q07654 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.93□□□□□ -2.26
TFF3Q07654 AIMP1P2-201ENST00000425294 312 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 HMGN2P10-201ENST00000448085 265 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 ATP5J2P3-201ENST00000451550 258 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 RPL31P58-201ENST00000469001 379 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 TPT1P8-201ENST00000510120 555 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 AC019176.1-201ENST00000518519 225 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 CIR1P1-201ENST00000524055 1133 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 AC008739.2-201ENST00000597006 317 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 SNORD14A-201ENST00000606526 91 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.93□□□□□ -2.26
TFF3Q07654 MIR6779-201ENST00000617283 64 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 MKKS-204ENST00000639674 192 ntBASIC0.93□□□□□ -2.26
TFF3Q07654 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 RNA5SP465-201ENST00000391195 109 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 RNA5SP354-201ENST00000391247 136 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 AL591704.2-201ENST00000421658 181 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 SDAD1P3-201ENST00000427380 333 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 AC079780.1-201ENST00000428259 207 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.92□□□□□ -2.26
TFF3Q07654 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
TFF3Q07654 AC092902.1-201ENST00000486999 259 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 SUMO2P6-201ENST00000505273 288 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.92□□□□□ -2.26
TFF3Q07654 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.92□□□□□ -2.26
TFF3Q07654 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.92□□□□□ -2.26
TFF3Q07654 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.92□□□□□ -2.26
TFF3Q07654 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 SNRPGP15-201ENST00000600149 222 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.92□□□□□ -2.26
TFF3Q07654 AC004241.3-201ENST00000611728 517 ntBASIC0.92□□□□□ -2.26
TFF3Q07654 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.92□□□□□ -2.26
TFF3Q07654 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.92□□□□□ -2.26
TFF3Q07654 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.91□□□□□ -2.26
TFF3Q07654 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TFF3Q07654 TXNP7-201ENST00000406296 293 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC244453.4-201ENST00000419150 388 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
TFF3Q07654 AC246680.2-201ENST00000422106 389 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC244035.1-201ENST00000430042 390 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 MTND4LP16-201ENST00000440828 295 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.91□□□□□ -2.26
TFF3Q07654 OSTCP8-201ENST00000445117 448 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.91□□□□□ -2.26
TFF3Q07654 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.91□□□□□ -2.26
TFF3Q07654 SNORD97-201ENST00000459187 142 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 RPL30P12-201ENST00000474666 353 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 MTND3P6-201ENST00000485242 339 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 RNA5SP468-201ENST00000516782 93 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 MTCYBP41-201ENST00000528913 1123 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC090616.5-202ENST00000582111 297 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.91□□□□□ -2.26
TFF3Q07654 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms