Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AL161734.1-201ENST00000609720 557 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS1Q01581 TPTE2P4-201ENST00000258589 1605 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS1Q01581 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 DEFB108F-201ENST00000344638 222 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 RNU6-97P-201ENST00000363387 104 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGCS1Q01581 RNU6-76P-201ENST00000384060 104 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 RNU6-198P-201ENST00000384258 104 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGCS1Q01581 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 CCDC58P2-201ENST00000417131 366 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 MTCO2P21-201ENST00000419780 677 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 MTND1P32-201ENST00000433043 938 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 Z80107.1-201ENST00000436830 412 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 SNRPEP7-201ENST00000438350 220 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 AL121871.1-201ENST00000443413 436 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AL592447.1-201ENST00000447592 540 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 MTCO1P27-201ENST00000448269 226 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC024589.1-201ENST00000512207 263 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 DEFB108D-201ENST00000527787 222 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGCS1Q01581 VN1R82P-201ENST00000601481 356 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC006023.1-201ENST00000603944 259 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC090186.1-201ENST00000605991 572 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC004067.1-201ENST00000608733 700 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 AC008669.1-201ENST00000565823 2178 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 MTCO1P9-201ENST00000505577 1534 ntBASIC2.37□□□□□ -2.03
HMGCS1Q01581 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 FAM133CP-201ENST00000332869 704 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 RNU5E-8P-201ENST00000363502 116 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 RNU6-359P-201ENST00000365466 108 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 RNU6-114P-201ENST00000384704 105 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 PPP1R11P2-201ENST00000423543 382 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL049714.1-201ENST00000466686 347 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC104563.1-201ENST00000476147 376 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC021382.1-201ENST00000483523 359 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC147055.4-201ENST00000504399 745 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGCS1Q01581 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL359273.1-201ENST00000510918 627 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC110760.3-202ENST00000515177 371 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 RNU5A-4P-201ENST00000516588 111 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 RPL12P50-201ENST00000603116 116 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AL356596.1-201ENST00000624230 379 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGCS1Q01581 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
HMGCS1Q01581 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGCS1Q01581 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC135776.4-201ENST00000624300 1904 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms