Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.23□□□□□ -1.73
IRF9Q00978 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.23□□□□□ -1.73
IRF9Q00978 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.23□□□□□ -1.73
IRF9Q00978 AC138761.3-201ENST00000579993 334 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IRF9Q00978 MIR5692C1-201ENST00000585309 91 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 PART1_1.1-201ENST00000611761 217 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.23□□□□□ -1.73
IRF9Q00978 MIR7703-201ENST00000620784 77 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 AC090971.5-201ENST00000621102 293 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.23□□□□□ -1.73
IRF9Q00978 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
IRF9Q00978 AL592182.3-201ENST00000642132 3304 ntBASIC4.23□□□□□ -1.73
IRF9Q00978 RPL32P3-201ENST00000359025 275 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 Y_RNA.135-201ENST00000363439 95 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
IRF9Q00978 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
IRF9Q00978 SNORD116-11-201ENST00000383882 92 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 RNU6-43P-201ENST00000384302 107 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 RNY4P36-201ENST00000391116 96 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AL139397.2-201ENST00000404529 772 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 RPS4XP7-201ENST00000406274 780 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 RPS16P5-201ENST00000406501 404 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.22□□□□□ -1.73
IRF9Q00978 RBMY1KP-201ENST00000423480 476 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.22□□□□□ -1.73
IRF9Q00978 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.22□□□□□ -1.73
IRF9Q00978 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 AC073264.2-201ENST00000448886 166 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 MTND1P17-201ENST00000448961 204 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 OR51K1P-201ENST00000510214 950 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 RNU6-1170P-201ENST00000515974 106 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AF186190.1-201ENST00000517470 480 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.22□□□□□ -1.73
IRF9Q00978 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 MED28P6-201ENST00000558776 231 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AC007151.1-201ENST00000572774 483 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.22□□□□□ -1.73
IRF9Q00978 AC002545.1-201ENST00000592511 181 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AL139395.1-201ENST00000603662 160 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.22□□□□□ -1.73
IRF9Q00978 AL138726.1-201ENST00000614873 333 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AP005019.3-201ENST00000620418 560 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 OR52H1-202ENST00000641796 1061 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 AC139713.2-214ENST00000642059 1811 ntBASIC4.22□□□□□ -1.73
IRF9Q00978 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.22□□□□□ -1.73
IRF9Q00978 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IRF9Q00978 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.22□□□□□ -1.73
IRF9Q00978 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IRF9Q00978 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IRF9Q00978 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
IRF9Q00978 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
IRF9Q00978 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.21□□□□□ -1.74
IRF9Q00978 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
IRF9Q00978 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
IRF9Q00978 OR5P1P-201ENST00000299512 925 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RNA5SP505-201ENST00000364748 108 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.21□□□□□ -1.74
IRF9Q00978 RNU6-398P-201ENST00000384143 109 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RNU6-45P-201ENST00000384471 107 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 Y_RNA.534-201ENST00000384599 112 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AL360182.1-201ENST00000397433 468 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RNU6-370P-201ENST00000411008 104 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.21□□□□□ -1.74
IRF9Q00978 AC245028.1-201ENST00000423259 256 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AF228730.2-201ENST00000438784 848 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RPL32P28-201ENST00000443577 397 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.21□□□□□ -1.74
IRF9Q00978 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
IRF9Q00978 RPL21P41-201ENST00000459863 264 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC087588.1-201ENST00000462203 316 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RN7SL585P-201ENST00000470538 280 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC117503.1-201ENST00000472241 394 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 NIP7P2-201ENST00000485801 544 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 RPS27P27-201ENST00000498779 255 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC008526.1-201ENST00000509149 338 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AP006289.1-201ENST00000538089 277 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.21□□□□□ -1.74
IRF9Q00978 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.21□□□□□ -1.74
IRF9Q00978 IMMP1LP2-201ENST00000552954 492 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.21□□□□□ -1.74
IRF9Q00978 MIR3921-201ENST00000577308 85 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC020910.2-201ENST00000603635 610 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AL627309.6-201ENST00000606857 840 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC084781.2-201ENST00000615568 161 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 AC008785.1-201ENST00000624475 456 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
IRF9Q00978 AC006971.1-201ENST00000407916 4486 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
IRF9Q00978 ZNF519P1-201ENST00000449011 1626 ntBASIC4.21□□□□□ -1.74
IRF9Q00978 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
IRF9Q00978 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms