Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
RPL39P62891 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.48□□□□□ -2.33
RPL39P62891 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.48□□□□□ -2.33
RPL39P62891 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.48□□□□□ -2.33
RPL39P62891 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RPL39P62891 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL39P62891 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.48□□□□□ -2.33
RPL39P62891 AL691517.1-201ENST00000440833 1235 ntBASIC0.48□□□□□ -2.33
RPL39P62891 PRPS1P1-201ENST00000445305 876 ntBASIC0.48□□□□□ -2.33
RPL39P62891 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL39P62891 RPS4XP11-201ENST00000446897 772 ntBASIC0.48□□□□□ -2.33
RPL39P62891 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RPL39P62891 AC108210.2-201ENST00000503681 201 ntBASIC0.48□□□□□ -2.33
RPL39P62891 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL39P62891 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC0.48□□□□□ -2.33
RPL39P62891 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
RPL39P62891 AC025754.2-201ENST00000606491 432 ntBASIC0.48□□□□□ -2.33
RPL39P62891 AL353997.5-201ENST00000618886 171 ntBASIC0.48□□□□□ -2.33
RPL39P62891 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL39P62891 AC068880.5-201ENST00000624331 290 ntBASIC0.48□□□□□ -2.33
RPL39P62891 RNU1-22P-201ENST00000363334 158 ntBASIC0.47□□□□□ -2.33
RPL39P62891 CYCSP33-201ENST00000414485 327 ntBASIC0.47□□□□□ -2.33
RPL39P62891 TRGV6-201ENST00000417928 299 ntBASIC0.47□□□□□ -2.33
RPL39P62891 CR848007.2-201ENST00000424918 787 ntBASIC0.47□□□□□ -2.33
RPL39P62891 TOMM20P4-201ENST00000427861 435 ntBASIC0.47□□□□□ -2.33
RPL39P62891 AC092393.1-201ENST00000439625 742 ntBASIC0.47□□□□□ -2.33
RPL39P62891 RN7SKP265-201ENST00000516448 223 ntBASIC0.47□□□□□ -2.33
RPL39P62891 SNORA31.16-201ENST00000516773 139 ntBASIC0.47□□□□□ -2.33
RPL39P62891 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL39P62891 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.47□□□□□ -2.33
RPL39P62891 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC0.47□□□□□ -2.33
RPL39P62891 IMMP1LP2-201ENST00000552954 492 ntBASIC0.47□□□□□ -2.33
RPL39P62891 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC0.47□□□□□ -2.33
RPL39P62891 CYCSP2-201ENST00000558168 301 ntBASIC0.47□□□□□ -2.33
RPL39P62891 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.47□□□□□ -2.33
RPL39P62891 AC243960.4-201ENST00000600532 288 ntBASIC0.47□□□□□ -2.33
RPL39P62891 DPRXP5-201ENST00000604662 539 ntBASIC0.47□□□□□ -2.33
RPL39P62891 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC0.47□□□□□ -2.33
RPL39P62891 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL39P62891 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.47□□□□□ -2.33
RPL39P62891 AC005539.1-201ENST00000443768 1479 ntBASIC0.47□□□□□ -2.33
RPL39P62891 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 Y_RNA.140-201ENST00000363474 103 ntBASIC0.46□□□□□ -2.34
RPL39P62891 SNORD114-27-201ENST00000363766 70 ntBASIC0.46□□□□□ -2.34
RPL39P62891 NPM1P10-201ENST00000398310 865 ntBASIC0.46□□□□□ -2.34
RPL39P62891 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
RPL39P62891 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 RNF2P1-201ENST00000442955 1010 ntBASIC0.46□□□□□ -2.34
RPL39P62891 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 AC008837.2-201ENST00000513076 418 ntBASIC0.46□□□□□ -2.34
RPL39P62891 RN7SKP219-201ENST00000516825 296 ntBASIC0.46□□□□□ -2.34
RPL39P62891 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 AP005205.1-201ENST00000563503 508 ntBASIC0.46□□□□□ -2.34
RPL39P62891 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL39P62891 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 AL773524.1-201ENST00000614065 229 ntBASIC0.46□□□□□ -2.34
RPL39P62891 AC145207.9-201ENST00000623802 325 ntBASIC0.46□□□□□ -2.34
RPL39P62891 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL39P62891 CR382285.2-201ENST00000624662 1495 ntBASIC0.46□□□□□ -2.34
RPL39P62891 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RPL39P62891 HSBP1P2-201ENST00000299671 229 ntBASIC0.45□□□□□ -2.34
RPL39P62891 Y_RNA.327-201ENST00000365201 102 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RNU6-1080P-201ENST00000383982 107 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RNU1-57P-201ENST00000384491 166 ntBASIC0.45□□□□□ -2.34
RPL39P62891 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RPL39P62891 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RPL39P62891 RNU6-193P-201ENST00000410977 107 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AL136133.1-201ENST00000413694 376 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC096920.1-201ENST00000423991 241 ntBASIC0.45□□□□□ -2.34
RPL39P62891 USP12PX-201ENST00000432383 1057 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC009296.1-201ENST00000443146 155 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.45□□□□□ -2.34
RPL39P62891 PTENP1-201ENST00000447117 1215 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RPL9P9-202ENST00000466501 579 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RN7SL429P-201ENST00000479090 223 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RN7SL489P-201ENST00000486185 223 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RN7SL327P-201ENST00000488659 223 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.45□□□□□ -2.34
RPL39P62891 SNORA48.11-201ENST00000517015 89 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.45□□□□□ -2.34
RPL39P62891 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.45□□□□□ -2.34
RPL39P62891 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL39P62891 AP000907.2-201ENST00000530827 353 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL39P62891 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL39P62891 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL39P62891 AC004817.2-201ENST00000561794 651 ntBASIC0.45□□□□□ -2.34
RPL39P62891 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RPL39P62891 MIR4529-201ENST00000578110 78 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.45□□□□□ -2.34
RPL39P62891 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL39P62891 NIFKP6-201ENST00000598115 845 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC012443.1-201ENST00000605605 231 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms