Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 U3.26-201ENST00000391236 204 ntBASIC1.36□□□□□ -2.19
LSM3P62310 RNU2-43P-201ENST00000410306 190 ntBASIC1.36□□□□□ -2.19
LSM3P62310 RNU2-15P-201ENST00000410692 191 ntBASIC1.36□□□□□ -2.19
LSM3P62310 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM3P62310 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.36□□□□□ -2.19
LSM3P62310 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.36□□□□□ -2.19
LSM3P62310 RPS15AP5-201ENST00000436276 388 ntBASIC1.36□□□□□ -2.19
LSM3P62310 RPL21P134-201ENST00000453468 483 ntBASIC1.36□□□□□ -2.19
LSM3P62310 RPL23AP3-201ENST00000453844 468 ntBASIC1.36□□□□□ -2.19
LSM3P62310 MTCO1P42-201ENST00000457379 726 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AC107032.1-201ENST00000485945 480 ntBASIC1.36□□□□□ -2.19
LSM3P62310 RPL23AP63-201ENST00000498752 471 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM3P62310 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
LSM3P62310 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.36□□□□□ -2.19
LSM3P62310 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AP005639.2-201ENST00000527592 928 ntBASIC1.36□□□□□ -2.19
LSM3P62310 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LSM3P62310 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM3P62310 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM3P62310 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM3P62310 AC068313.1-201ENST00000604028 1008 ntBASIC1.36□□□□□ -2.19
LSM3P62310 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM3P62310 AC010329.5-201ENST00000623497 2174 ntBASIC1.36□□□□□ -2.19
LSM3P62310 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LSM3P62310 OR4G2P-202ENST00000641004 1759 ntBASIC1.35□□□□□ -2.19
LSM3P62310 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LSM3P62310 RNA5SP88-201ENST00000365560 109 ntBASIC1.35□□□□□ -2.19
LSM3P62310 GSTA9P-201ENST00000406231 611 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.35□□□□□ -2.19
LSM3P62310 HMGB1P9-201ENST00000429856 646 ntBASIC1.35□□□□□ -2.19
LSM3P62310 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.35□□□□□ -2.19
LSM3P62310 AL353689.1-201ENST00000438895 199 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC017007.3-201ENST00000479865 435 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM3P62310 RNU6-1282P-201ENST00000516735 96 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.35□□□□□ -2.19
LSM3P62310 ZNF705CP-201ENST00000530515 889 ntBASIC1.35□□□□□ -2.19
LSM3P62310 ARL2BPP2-201ENST00000550907 489 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM3P62310 AC025165.5-201ENST00000602802 578 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AL109918.3-201ENST00000603072 338 ntBASIC1.35□□□□□ -2.19
LSM3P62310 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LSM3P62310 AC008498.1-201ENST00000613012 531 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.35□□□□□ -2.19
LSM3P62310 AL136981.2-201ENST00000617319 734 ntBASIC1.35□□□□□ -2.19
LSM3P62310 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LSM3P62310 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
LSM3P62310 AP000648.3-201ENST00000623539 4507 ntBASIC1.35□□□□□ -2.19
LSM3P62310 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.35□□□□□ -2.19
LSM3P62310 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.35□□□□□ -2.19
LSM3P62310 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LSM3P62310 AC007785.2-201ENST00000598627 1916 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AC006026.1-201ENST00000444025 1803 ntBASIC1.34□□□□□ -2.19
LSM3P62310 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
LSM3P62310 MIR23B-201ENST00000384832 97 ntBASIC1.34□□□□□ -2.19
LSM3P62310 MIR491-201ENST00000384877 84 ntBASIC1.34□□□□□ -2.19
LSM3P62310 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LSM3P62310 SNORA40.18-201ENST00000391200 128 ntBASIC1.34□□□□□ -2.19
LSM3P62310 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM3P62310 Z98742.3-201ENST00000418637 326 ntBASIC1.34□□□□□ -2.19
LSM3P62310 NDUFB4P7-201ENST00000423198 363 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AL445669.1-201ENST00000426743 755 ntBASIC1.34□□□□□ -2.19
LSM3P62310 RPL30P4-201ENST00000429309 333 ntBASIC1.34□□□□□ -2.19
LSM3P62310 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM3P62310 GTF2IP7-202ENST00000436677 309 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AL353705.4-201ENST00000449661 238 ntBASIC1.34□□□□□ -2.19
LSM3P62310 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 RFC5P1-201ENST00000454419 874 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM3P62310 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM3P62310 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM3P62310 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM3P62310 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.34□□□□□ -2.19
LSM3P62310 RPAP2P1-201ENST00000603626 1168 ntBASIC1.34□□□□□ -2.19
LSM3P62310 AL589743.7-201ENST00000612637 233 ntBASIC1.34□□□□□ -2.19
LSM3P62310 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LSM3P62310 SEC63P2-201ENST00000503863 1939 ntBASIC1.34□□□□□ -2.2
LSM3P62310 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.34□□□□□ -2.2
LSM3P62310 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
LSM3P62310 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.34□□□□□ -2.2
LSM3P62310 MTND5P29-201ENST00000458676 1807 ntBASIC1.33□□□□□ -2.2
LSM3P62310 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LSM3P62310 WWP1P1-201ENST00000466609 2769 ntBASIC1.33□□□□□ -2.2
LSM3P62310 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
LSM3P62310 MIR208A-201ENST00000362287 71 ntBASIC1.33□□□□□ -2.2
LSM3P62310 RNU5A-1-201ENST00000362698 116 ntBASIC1.33□□□□□ -2.2
LSM3P62310 RNA5SP27-201ENST00000363839 119 ntBASIC1.33□□□□□ -2.2
LSM3P62310 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LSM3P62310 Z98749.2-208ENST00000381646 500 ntBASIC1.33□□□□□ -2.2
LSM3P62310 RNU6-1005P-201ENST00000384519 107 ntBASIC1.33□□□□□ -2.2
LSM3P62310 AC016769.3-201ENST00000396562 315 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms