Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.94□□□□□ -2.1
ACTBP60709 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.94□□□□□ -2.1
ACTBP60709 MIR4435-1-201ENST00000582552 80 ntBASIC1.94□□□□□ -2.1
ACTBP60709 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
ACTBP60709 AC004853.1-201ENST00000604902 698 ntBASIC1.94□□□□□ -2.1
ACTBP60709 AL450472.3-201ENST00000615578 367 ntBASIC1.94□□□□□ -2.1
ACTBP60709 AC010975.3-201ENST00000618727 978 ntBASIC1.94□□□□□ -2.1
ACTBP60709 MIR6130-201ENST00000619419 109 ntBASIC1.94□□□□□ -2.1
ACTBP60709 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.94□□□□□ -2.1
ACTBP60709 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.94□□□□□ -2.1
ACTBP60709 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.94□□□□□ -2.1
ACTBP60709 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
ACTBP60709 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.93□□□□□ -2.1
ACTBP60709 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.93□□□□□ -2.1
ACTBP60709 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 SNORA36C-201ENST00000384289 132 ntBASIC1.93□□□□□ -2.1
ACTBP60709 MIR514A1-201ENST00000385133 98 ntBASIC1.93□□□□□ -2.1
ACTBP60709 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.93□□□□□ -2.1
ACTBP60709 RN7SKP140-201ENST00000411196 284 ntBASIC1.93□□□□□ -2.1
ACTBP60709 HMGB3P2-201ENST00000411913 584 ntBASIC1.93□□□□□ -2.1
ACTBP60709 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 SRIP2-201ENST00000428470 166 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 RPS15AP28-201ENST00000435088 386 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.93□□□□□ -2.1
ACTBP60709 Z82210.1-201ENST00000440037 231 ntBASIC1.93□□□□□ -2.1
ACTBP60709 BNIP3P2-201ENST00000441221 577 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 MRPL42P4-201ENST00000453267 443 ntBASIC1.93□□□□□ -2.1
ACTBP60709 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.93□□□□□ -2.1
ACTBP60709 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.93□□□□□ -2.1
ACTBP60709 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
ACTBP60709 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
ACTBP60709 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.93□□□□□ -2.1
ACTBP60709 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 AC022662.1-201ENST00000580252 331 ntBASIC1.93□□□□□ -2.1
ACTBP60709 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.93□□□□□ -2.1
ACTBP60709 AC026741.1-201ENST00000605892 482 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AC103810.6-201ENST00000606708 136 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AC253576.2-201ENST00000618815 580 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AL160394.1-201ENST00000624765 724 ntBASIC1.93□□□□□ -2.1
ACTBP60709 AP003400.5-201ENST00000624827 617 ntBASIC1.93□□□□□ -2.1
ACTBP60709 IGHVIII-44-202ENST00000636235 289 ntBASIC1.93□□□□□ -2.1
ACTBP60709 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ACTBP60709 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ACTBP60709 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ACTBP60709 OR5H15-201ENST00000383696 930 ntBASIC1.92□□□□□ -2.1
ACTBP60709 RNU6-1300P-201ENST00000391046 108 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC092047.1-201ENST00000424997 240 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC004383.1-201ENST00000438135 289 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC092393.1-201ENST00000439625 742 ntBASIC1.92□□□□□ -2.1
ACTBP60709 MTCYBP11-201ENST00000447254 1109 ntBASIC1.92□□□□□ -2.1
ACTBP60709 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTBP60709 MTND2P24-201ENST00000453434 806 ntBASIC1.92□□□□□ -2.1
ACTBP60709 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTBP60709 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
ACTBP60709 MRPS17P3-201ENST00000465453 385 ntBASIC1.92□□□□□ -2.1
ACTBP60709 RPS15AP17-201ENST00000470598 390 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.92□□□□□ -2.1
ACTBP60709 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTBP60709 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTBP60709 AC114781.4-201ENST00000513707 639 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC017037.2-201ENST00000513850 890 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTBP60709 MIR892C-201ENST00000516410 77 ntBASIC1.92□□□□□ -2.1
ACTBP60709 RNA5SP291-201ENST00000517222 105 ntBASIC1.92□□□□□ -2.1
ACTBP60709 HSPA8P13-201ENST00000523715 472 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC021269.2-201ENST00000532318 330 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AL132857.1-201ENST00000555180 708 ntBASIC1.92□□□□□ -2.1
ACTBP60709 HSPE1P3-201ENST00000559254 309 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.92□□□□□ -2.1
ACTBP60709 HMGN2P15-201ENST00000585707 270 ntBASIC1.92□□□□□ -2.1
ACTBP60709 APOOP1-201ENST00000604695 592 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AL596245.1-201ENST00000618994 362 ntBASIC1.92□□□□□ -2.1
ACTBP60709 AC093875.1-201ENST00000623688 504 ntBASIC1.92□□□□□ -2.1
ACTBP60709 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
ACTBP60709 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.92□□□□□ -2.1
ACTBP60709 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
ACTBP60709 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ACTBP60709 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
ACTBP60709 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACTBP60709 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
ACTBP60709 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 OR56A5-201ENST00000340110 738 ntBASIC1.91□□□□□ -2.1
ACTBP60709 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
ACTBP60709 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-741P-201ENST00000383889 107 ntBASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-207P-201ENST00000384137 107 ntBASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-217P-201ENST00000384164 104 ntBASIC1.91□□□□□ -2.1
ACTBP60709 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
ACTBP60709 RN7SKP158-201ENST00000410453 326 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms