Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.86□□□□□ -1.79
CLRN1P58418 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLRN1P58418 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
CLRN1P58418 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 ZNF519P1-201ENST00000449011 1626 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLRN1P58418 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.85□□□□□ -1.79
CLRN1P58418 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CLRN1P58418 MIR331-201ENST00000362302 94 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 Y_RNA.135-201ENST00000363439 95 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNA5SP28-201ENST00000363841 119 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNU6-173P-201ENST00000364215 104 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNU6-335P-201ENST00000364563 113 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 U3.15-201ENST00000365398 212 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 SNORA4.3-201ENST00000365564 137 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 MIR559-201ENST00000385188 96 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 MIR708-201ENST00000390708 88 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AL139397.2-201ENST00000404529 772 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNA5SP146-201ENST00000410743 123 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 MTND2P23-201ENST00000422990 651 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 ABCF2P2-201ENST00000450549 296 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 NIPA2P5-201ENST00000452282 464 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RNU7-152P-201ENST00000458982 64 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AC087884.1-201ENST00000469738 328 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AC010285.1-201ENST00000470580 392 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AL049874.1-201ENST00000489560 388 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC009901.1-201ENST00000506703 541 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 PPBPP1-201ENST00000510807 373 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.85□□□□□ -1.79
CLRN1P58418 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN1P58418 AC113403.1-201ENST00000604910 193 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AL080274.1-201ENST00000605565 220 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AL355365.1-201ENST00000616480 294 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AC022418.1-201ENST00000624118 445 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLRN1P58418 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 MTCO1P12-201ENST00000414273 1543 ntBASIC3.85□□□□□ -1.79
CLRN1P58418 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN1P58418 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLRN1P58418 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CLRN1P58418 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CLRN1P58418 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
CLRN1P58418 Y_RNA.216-201ENST00000364205 93 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 RNU6-45P-201ENST00000384471 107 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 SNORA75.4-201ENST00000391278 119 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AL360182.1-201ENST00000397433 468 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AL121834.1-202ENST00000404494 277 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RPL5P18-201ENST00000406671 891 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.84□□□□□ -1.79
CLRN1P58418 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN1P58418 MRPS31P2-201ENST00000451581 518 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 Y_RNA.631-201ENST00000459607 101 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AC104472.2-201ENST00000469035 601 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RN7SL810P-201ENST00000493031 276 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 HMGB1P22-201ENST00000505315 124 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RNU6-327P-201ENST00000516270 127 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RNU6-914P-201ENST00000516749 109 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RNU6-323P-201ENST00000521915 107 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 ELOCP31-201ENST00000540463 467 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN1P58418 MTND6P33-201ENST00000571794 183 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN1P58418 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CLRN1P58418 AC012119.1-201ENST00000603184 222 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 SNRPGP17-201ENST00000603780 214 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLRN1P58418 AC140479.6-201ENST00000633535 357 ntBASIC3.84□□□□□ -1.79
CLRN1P58418 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CLRN1P58418 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN1P58418 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CLRN1P58418 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLRN1P58418 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLRN1P58418 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLRN1P58418 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLRN1P58418 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.8
CLRN1P58418 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms