Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CR769776.1-201ENST00000441254 787 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PKNOX1P55347 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 HSPE1P23-201ENST00000509838 286 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 RNU6-840P-201ENST00000517275 65 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 MTND2P32-201ENST00000521584 1038 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 MTCO1P47-201ENST00000523889 1271 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 TRAV28-201ENST00000557548 323 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC087465.1-201ENST00000560574 245 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC090888.1-201ENST00000561335 1141 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 AC136618.2-201ENST00000575091 400 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC060771.1-201ENST00000582031 164 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.5□□□□□ -2.01
PKNOX1P55347 AL391001.1-201ENST00000602747 715 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC144521.1-201ENST00000607148 956 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC024560.3-201ENST00000608482 349 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC022960.3-201ENST00000619794 441 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 PCMTD1P7-201ENST00000634506 357 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.5□□□□□ -2.01
PKNOX1P55347 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PKNOX1P55347 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PKNOX1P55347 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX1P55347 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX1P55347 RNU1-105P-201ENST00000363470 161 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX1P55347 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PKNOX1P55347 RN7SKP140-201ENST00000411196 284 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.49□□□□□ -2.01
PKNOX1P55347 MTCO2P21-201ENST00000419780 677 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AC099548.1-201ENST00000421443 426 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.49□□□□□ -2.01
PKNOX1P55347 AC092047.1-201ENST00000424997 240 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 Z82210.1-201ENST00000440037 231 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 RPS20P20-201ENST00000460498 340 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AC034222.1-201ENST00000494052 532 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.49□□□□□ -2.01
PKNOX1P55347 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.49□□□□□ -2.01
PKNOX1P55347 TPT1P8-201ENST00000510120 555 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.49□□□□□ -2.01
PKNOX1P55347 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 TPMTP1-201ENST00000592307 737 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AC008739.2-201ENST00000597006 317 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
PKNOX1P55347 AL356596.1-201ENST00000624230 379 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 ZNF876P-202ENST00000398732 1485 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 MTND5P33-201ENST00000571250 1450 ntBASIC2.49□□□□□ -2.01
PKNOX1P55347 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PKNOX1P55347 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.48□□□□□ -2.01
PKNOX1P55347 FAM133CP-201ENST00000332869 704 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-931P-201ENST00000363850 107 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-741P-201ENST00000383889 107 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-723P-201ENST00000383973 107 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-432P-201ENST00000384196 109 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC080125.1-201ENST00000414888 684 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 UBE2FP1-201ENST00000416536 447 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AL451054.2-201ENST00000420896 202 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.48□□□□□ -2.01
PKNOX1P55347 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.48□□□□□ -2.01
PKNOX1P55347 ARPC3P1-201ENST00000437218 533 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC105272.1-201ENST00000438604 198 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.48□□□□□ -2.01
PKNOX1P55347 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.48□□□□□ -2.01
PKNOX1P55347 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU7-23P-201ENST00000459465 62 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC020699.1-201ENST00000505161 445 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PKNOX1P55347 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-311P-201ENST00000516224 102 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC243972.3-201ENST00000539655 198 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.48□□□□□ -2.01
PKNOX1P55347 RPL23AP84-201ENST00000571193 464 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.48□□□□□ -2.01
PKNOX1P55347 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
PKNOX1P55347 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.48□□□□□ -2.01
PKNOX1P55347 AL357094.1-201ENST00000603845 844 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PKNOX1P55347 BCRP9-201ENST00000605312 388 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC107952.2-201ENST00000606048 486 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 RNU6-88P-201ENST00000606801 100 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC097468.3-201ENST00000607956 456 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC027449.1-201ENST00000608890 407 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AL161734.1-201ENST00000609720 557 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC104237.2-201ENST00000612456 443 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PKNOX1P55347 AC093838.1-201ENST00000613014 469 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC010133.1-201ENST00000615809 842 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms