Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.47□□□□□ -2.01
CDH6P55285 CCT4P2-201ENST00000233836 1548 ntBASIC2.47□□□□□ -2.01
CDH6P55285 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
CDH6P55285 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.01
CDH6P55285 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH6P55285 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CDH6P55285 AL359693.1-201ENST00000614959 2407 ntBASIC2.46□□□□□ -2.02
CDH6P55285 RNU6-461P-201ENST00000364195 107 ntBASIC2.46□□□□□ -2.02
CDH6P55285 U3.12-201ENST00000364498 214 ntBASIC2.46□□□□□ -2.02
CDH6P55285 SNORA23-201ENST00000365128 182 ntBASIC2.46□□□□□ -2.02
CDH6P55285 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 RNU6-1207P-201ENST00000384343 107 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AL109755.1-201ENST00000401791 649 ntBASIC2.46□□□□□ -2.02
CDH6P55285 RNU2-33P-201ENST00000410344 192 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH6P55285 BX119904.4-201ENST00000424402 301 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH6P55285 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH6P55285 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 AC104563.1-201ENST00000476147 376 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC021382.1-201ENST00000483523 359 ntBASIC2.46□□□□□ -2.02
CDH6P55285 LINC00888-204ENST00000487386 421 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH6P55285 RNY4P37-201ENST00000516225 96 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AP003467.2-201ENST00000520175 319 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC022634.1-201ENST00000520765 532 ntBASIC2.46□□□□□ -2.02
CDH6P55285 COX6CP5-201ENST00000527162 228 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AP003497.1-201ENST00000528472 562 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC087276.1-201ENST00000529659 480 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC021269.2-201ENST00000532318 330 ntBASIC2.46□□□□□ -2.02
CDH6P55285 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CDH6P55285 MTND3P13-201ENST00000574391 343 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC005951.2-201ENST00000576282 495 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 AC092574.1-201ENST00000609771 420 ntBASIC2.46□□□□□ -2.02
CDH6P55285 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH6P55285 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH6P55285 AL138713.1-201ENST00000624026 2130 ntBASIC2.45□□□□□ -2.02
CDH6P55285 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH6P55285 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH6P55285 AC007064.1-201ENST00000412238 351 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH6P55285 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.45□□□□□ -2.02
CDH6P55285 NANOGP5-201ENST00000424456 877 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC007919.1-201ENST00000429380 217 ntBASIC2.45□□□□□ -2.02
CDH6P55285 MTND5P14-201ENST00000441481 1267 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
CDH6P55285 RBM43P1-201ENST00000476891 1081 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC022447.3-201ENST00000506865 495 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC234781.5-201ENST00000508429 271 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC114781.4-201ENST00000513707 639 ntBASIC2.45□□□□□ -2.02
CDH6P55285 RNA5SP24-201ENST00000516478 95 ntBASIC2.45□□□□□ -2.02
CDH6P55285 NRON-201ENST00000517270 370 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH6P55285 HMGN1P28-201ENST00000521340 364 ntBASIC2.45□□□□□ -2.02
CDH6P55285 DEFB131D-201ENST00000526803 184 ntBASIC2.45□□□□□ -2.02
CDH6P55285 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH6P55285 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH6P55285 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.45□□□□□ -2.02
CDH6P55285 AL512347.1-201ENST00000566420 503 ntBASIC2.45□□□□□ -2.02
CDH6P55285 HMGN2P15-201ENST00000585707 270 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH6P55285 BNIP3P26-201ENST00000600827 554 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AL606834.3-201ENST00000602615 496 ntBASIC2.45□□□□□ -2.02
CDH6P55285 AC103810.6-201ENST00000606708 136 ntBASIC2.45□□□□□ -2.02
CDH6P55285 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.45□□□□□ -2.02
CDH6P55285 MTND1P37-201ENST00000636562 264 ntBASIC2.45□□□□□ -2.02
CDH6P55285 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH6P55285 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH6P55285 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH6P55285 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 RNU6-754P-201ENST00000391166 107 ntBASIC2.44□□□□□ -2.02
CDH6P55285 RNA5SP80-201ENST00000410475 111 ntBASIC2.44□□□□□ -2.02
CDH6P55285 MTND1P21-201ENST00000412991 285 ntBASIC2.44□□□□□ -2.02
CDH6P55285 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.44□□□□□ -2.02
CDH6P55285 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH6P55285 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH6P55285 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH6P55285 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH6P55285 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH6P55285 MRPS17P3-201ENST00000465453 385 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AC135721.1-201ENST00000497954 479 ntBASIC2.44□□□□□ -2.02
CDH6P55285 RNU6-276P-201ENST00000516114 96 ntBASIC2.44□□□□□ -2.02
CDH6P55285 ATP5F1P5-201ENST00000526403 760 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AP001646.1-201ENST00000527936 915 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH6P55285 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
CDH6P55285 MIR4672-201ENST00000583126 81 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AC021749.1-201ENST00000604322 607 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH6P55285 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
CDH6P55285 AC008498.1-201ENST00000613012 531 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms