Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MSH6P52701 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.77□□□□□ -1.97
MSH6P52701 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.77□□□□□ -1.97
MSH6P52701 RABEPKP1-201ENST00000440529 1026 ntBASIC2.77□□□□□ -1.97
MSH6P52701 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.77□□□□□ -1.97
MSH6P52701 RNU6-1095P-201ENST00000516148 108 ntBASIC2.77□□□□□ -1.97
MSH6P52701 SNORA25.15-201ENST00000516487 89 ntBASIC2.77□□□□□ -1.97
MSH6P52701 RNU6-56P-201ENST00000516986 93 ntBASIC2.77□□□□□ -1.97
MSH6P52701 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.77□□□□□ -1.97
MSH6P52701 AC118942.1-201ENST00000529674 1035 ntBASIC2.77□□□□□ -1.97
MSH6P52701 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.77□□□□□ -1.97
MSH6P52701 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.77□□□□□ -1.97
MSH6P52701 AP001029.3-201ENST00000588063 596 ntBASIC2.77□□□□□ -1.97
MSH6P52701 AL022067.1-201ENST00000602426 454 ntBASIC2.77□□□□□ -1.97
MSH6P52701 AC010738.1-201ENST00000604970 987 ntBASIC2.77□□□□□ -1.97
MSH6P52701 AC005332.6-201ENST00000613178 446 ntBASIC2.77□□□□□ -1.97
MSH6P52701 AC106858.1-201ENST00000637497 429 ntBASIC2.77□□□□□ -1.97
MSH6P52701 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
MSH6P52701 Y_RNA.25-201ENST00000362528 102 ntBASIC2.76□□□□□ -1.97
MSH6P52701 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.76□□□□□ -1.97
MSH6P52701 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 PSMA6P3-201ENST00000428242 164 ntBASIC2.76□□□□□ -1.97
MSH6P52701 EZH2P1-201ENST00000431167 291 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.76□□□□□ -1.97
MSH6P52701 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
MSH6P52701 MTCYBP11-201ENST00000447254 1109 ntBASIC2.76□□□□□ -1.97
MSH6P52701 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MSH6P52701 AC006390.1-201ENST00000508068 283 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.76□□□□□ -1.97
MSH6P52701 AC117532.1-201ENST00000514638 323 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC087808.1-201ENST00000520501 361 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.76□□□□□ -1.97
MSH6P52701 AC125611.1-201ENST00000549563 229 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.76□□□□□ -1.97
MSH6P52701 MIR5002-201ENST00000584713 97 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AL110115.1-201ENST00000614396 364 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC104985.3-201ENST00000623479 597 ntBASIC2.76□□□□□ -1.97
MSH6P52701 AC091953.2-201ENST00000623979 160 ntBASIC2.76□□□□□ -1.97
MSH6P52701 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.76□□□□□ -1.97
MSH6P52701 U6.101-201ENST00000637707 76 ntBASIC2.76□□□□□ -1.97
MSH6P52701 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 Z82195.2-201ENST00000612348 18351 ntBASIC2.76□□□□□ -1.97
MSH6P52701 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MSH6P52701 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.76□□□□□ -1.97
MSH6P52701 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MSH6P52701 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MSH6P52701 RNU4-51P-201ENST00000364206 140 ntBASIC2.75□□□□□ -1.97
MSH6P52701 RNU6-1074P-201ENST00000383995 104 ntBASIC2.75□□□□□ -1.97
MSH6P52701 RNU6-224P-201ENST00000384055 107 ntBASIC2.75□□□□□ -1.97
MSH6P52701 RNU6-878P-201ENST00000384578 110 ntBASIC2.75□□□□□ -1.97
MSH6P52701 Y_RNA.578-201ENST00000390903 88 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AL627390.1-201ENST00000396055 340 ntBASIC2.75□□□□□ -1.97
MSH6P52701 RNU2-15P-201ENST00000410692 191 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
MSH6P52701 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.75□□□□□ -1.97
MSH6P52701 USP9YP22-201ENST00000438971 294 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC003989.2-201ENST00000440224 169 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.75□□□□□ -1.97
MSH6P52701 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.75□□□□□ -1.97
MSH6P52701 AC104982.1-201ENST00000478775 574 ntBASIC2.75□□□□□ -1.97
MSH6P52701 MTCYBP16-201ENST00000509187 1129 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC105914.1-201ENST00000511798 226 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.75□□□□□ -1.97
MSH6P52701 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.75□□□□□ -1.97
MSH6P52701 AC010376.1-201ENST00000522101 334 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.75□□□□□ -1.97
MSH6P52701 NDUFA5P6-201ENST00000542110 379 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.75□□□□□ -1.97
MSH6P52701 SNORD84-203ENST00000584275 78 ntBASIC2.75□□□□□ -1.97
MSH6P52701 BNIP3P24-201ENST00000593398 557 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC245036.5-201ENST00000596330 847 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC112220.2-201ENST00000605513 533 ntBASIC2.75□□□□□ -1.97
MSH6P52701 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AC123767.1-202ENST00000620407 817 ntBASIC2.75□□□□□ -1.97
MSH6P52701 AL353748.2-201ENST00000622148 471 ntBASIC2.75□□□□□ -1.97
MSH6P52701 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MSH6P52701 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MSH6P52701 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.75□□□□□ -1.97
MSH6P52701 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.75□□□□□ -1.97
MSH6P52701 SNRPEP3-201ENST00000338402 276 ntBASIC2.74□□□□□ -1.97
MSH6P52701 snoZ40.1-201ENST00000364540 72 ntBASIC2.74□□□□□ -1.97
MSH6P52701 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
MSH6P52701 MIR7-2-201ENST00000384970 110 ntBASIC2.74□□□□□ -1.97
MSH6P52701 RNU6-1077P-201ENST00000410506 102 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AF274854.1-201ENST00000413236 615 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC007435.1-201ENST00000421086 415 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC079780.1-201ENST00000428259 207 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH6P52701 ATP5F1P1-201ENST00000433775 569 ntBASIC2.74□□□□□ -1.97
MSH6P52701 GTF2IP3-201ENST00000433887 494 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC079203.1-201ENST00000487972 404 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC140059.1-201ENST00000489238 361 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC010625.1-201ENST00000511296 403 ntBASIC2.74□□□□□ -1.97
MSH6P52701 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH6P52701 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
MSH6P52701 RNA5SP490-201ENST00000517141 136 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms