Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP005639.2-201ENST00000527592 928 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 SETP2-201ENST00000553886 926 ntBASIC4.58□□□□□ -1.68
MRE11P49959 MIR5685-201ENST00000579080 79 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.58□□□□□ -1.68
MRE11P49959 AC104984.5-201ENST00000586878 94 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC007687.1-201ENST00000602704 304 ntBASIC4.58□□□□□ -1.68
MRE11P49959 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.58□□□□□ -1.68
MRE11P49959 uc_338.12-201ENST00000616344 181 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RMST_7.1-201ENST00000621935 268 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AL159972.1-201ENST00000625150 448 ntBASIC4.58□□□□□ -1.68
MRE11P49959 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRE11P49959 CEP170P1-201ENST00000502249 4587 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRE11P49959 AC009902.3-201ENST00000606235 2172 ntBASIC4.58□□□□□ -1.68
MRE11P49959 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRE11P49959 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 AC011978.2-201ENST00000569835 2054 ntBASIC4.57□□□□□ -1.68
MRE11P49959 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 Y_RNA.67-201ENST00000362870 100 ntBASIC4.57□□□□□ -1.68
MRE11P49959 RNU6-996P-201ENST00000365438 107 ntBASIC4.57□□□□□ -1.68
MRE11P49959 SNORD82-201ENST00000365530 70 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AL583835.1-201ENST00000399570 407 ntBASIC4.57□□□□□ -1.68
MRE11P49959 MIR1251-201ENST00000408552 70 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.57□□□□□ -1.68
MRE11P49959 AL157831.1-201ENST00000426134 473 ntBASIC4.57□□□□□ -1.68
MRE11P49959 TIMM9P1-201ENST00000436122 256 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.57□□□□□ -1.68
MRE11P49959 AL138799.3-201ENST00000438968 350 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AC093156.1-201ENST00000440382 670 ntBASIC4.57□□□□□ -1.68
MRE11P49959 NANOGP10-201ENST00000453325 895 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AC104308.1-201ENST00000454621 333 ntBASIC4.57□□□□□ -1.68
MRE11P49959 RPS20P21-201ENST00000466859 343 ntBASIC4.57□□□□□ -1.68
MRE11P49959 RPL23AP14-201ENST00000468281 468 ntBASIC4.57□□□□□ -1.68
MRE11P49959 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
MRE11P49959 AL163973.1-201ENST00000484753 577 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AC068305.1-201ENST00000497406 726 ntBASIC4.57□□□□□ -1.68
MRE11P49959 HSPD1P15-201ENST00000505573 1122 ntBASIC4.57□□□□□ -1.68
MRE11P49959 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 FTH1P9-201ENST00000513251 355 ntBASIC4.57□□□□□ -1.68
MRE11P49959 SNORA19.2-201ENST00000516013 114 ntBASIC4.57□□□□□ -1.68
MRE11P49959 BTF3P12-201ENST00000519620 469 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AP003072.1-201ENST00000531740 145 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AC087241.2-201ENST00000535801 324 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.57□□□□□ -1.68
MRE11P49959 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
MRE11P49959 AC105224.1-201ENST00000587055 421 ntBASIC4.57□□□□□ -1.68
MRE11P49959 AL121772.2-201ENST00000614331 297 ntBASIC4.57□□□□□ -1.68
MRE11P49959 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.57□□□□□ -1.68
MRE11P49959 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MRE11P49959 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.56□□□□□ -1.68
MRE11P49959 SNORA32.2-201ENST00000384049 122 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RNU6-356P-201ENST00000384140 107 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RNU6-510P-201ENST00000391239 108 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RPL21P65-201ENST00000406094 466 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC009161.1-201ENST00000417306 376 ntBASIC4.56□□□□□ -1.68
MRE11P49959 SAR1AP4-201ENST00000429225 591 ntBASIC4.56□□□□□ -1.68
MRE11P49959 NDUFA5P4-201ENST00000436704 385 ntBASIC4.56□□□□□ -1.68
MRE11P49959 FTH1P1-201ENST00000437933 532 ntBASIC4.56□□□□□ -1.68
MRE11P49959 MTCYBP6-201ENST00000441810 138 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 MTND4P19-201ENST00000446659 478 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC073415.1-201ENST00000449240 153 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.56□□□□□ -1.68
MRE11P49959 AP001486.1-201ENST00000463339 476 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RN7SL429P-201ENST00000479090 223 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RN7SL489P-201ENST00000486185 223 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RN7SL327P-201ENST00000488659 223 ntBASIC4.56□□□□□ -1.68
MRE11P49959 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.56□□□□□ -1.68
MRE11P49959 AC026784.1-201ENST00000507986 352 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC074250.1-201ENST00000511117 192 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.56□□□□□ -1.68
MRE11P49959 SNORD27.1-201ENST00000516319 72 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.56□□□□□ -1.68
MRE11P49959 OR4P1P-201ENST00000530808 1136 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.56□□□□□ -1.68
MRE11P49959 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.56□□□□□ -1.68
MRE11P49959 GLUD1P4-201ENST00000590914 418 ntBASIC4.56□□□□□ -1.68
MRE11P49959 RN7SL853P-201ENST00000617250 223 ntBASIC4.56□□□□□ -1.68
MRE11P49959 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
MRE11P49959 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.56□□□□□ -1.68
MRE11P49959 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MRE11P49959 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
MRE11P49959 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.55□□□□□ -1.68
MRE11P49959 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms