Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN9P43378 AC007283.2-201ENST00000424739 197 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 GPR143P-201ENST00000434155 205 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN9P43378 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.58□□□□□ -1.84
PTPN9P43378 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 RPL23AP31-201ENST00000456160 467 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN9P43378 AC007182.2-201ENST00000489251 402 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN9P43378 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN9P43378 SNORA31.8-201ENST00000516327 108 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 OR5G4P-201ENST00000525251 760 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN9P43378 AC123904.3-201ENST00000547218 814 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AC124947.2-202ENST00000552735 133 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN9P43378 MIR3921-201ENST00000577308 85 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 MIR3158-1-201ENST00000583596 81 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AC025165.5-201ENST00000602802 578 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AC006133.1-201ENST00000617106 264 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 AL158209.2-201ENST00000619266 216 ntBASIC3.58□□□□□ -1.84
PTPN9P43378 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PTPN9P43378 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN9P43378 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
PTPN9P43378 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN9P43378 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PTPN9P43378 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN9P43378 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN9P43378 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN9P43378 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN9P43378 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN9P43378 SNORD56.2-201ENST00000363242 71 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 SNORA36C-201ENST00000384289 132 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 TXNP7-201ENST00000406296 293 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 RNU4-55P-201ENST00000410731 137 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN9P43378 RPS29P4-201ENST00000414733 161 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN9P43378 GOT2P5-201ENST00000433995 546 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC140076.1-201ENST00000449897 361 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 MRPS31P2-201ENST00000451581 518 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN9P43378 AC022364.2-201ENST00000457963 554 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 VN1R17P-201ENST00000472048 1090 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC025518.1-201ENST00000479856 347 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.57□□□□□ -1.84
PTPN9P43378 AC110768.1-201ENST00000509222 400 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 RNU7-51P-201ENST00000516560 62 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 RNU6-410P-201ENST00000517006 107 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.57□□□□□ -1.84
PTPN9P43378 AP001893.2-201ENST00000526949 202 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
PTPN9P43378 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PTPN9P43378 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN9P43378 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.57□□□□□ -1.84
PTPN9P43378 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 MIR1254-2-201ENST00000579553 63 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 MIR3922-201ENST00000585192 84 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.57□□□□□ -1.84
PTPN9P43378 AC107304.1-201ENST00000604229 296 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN9P43378 AC017083.3-201ENST00000609955 700 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PTPN9P43378 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 AL359880.1-201ENST00000621879 266 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AC009161.2-201ENST00000624626 138 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 AL136313.1-201ENST00000624804 202 ntBASIC3.57□□□□□ -1.84
PTPN9P43378 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN9P43378 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
PTPN9P43378 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN9P43378 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN9P43378 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN9P43378 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PTPN9P43378 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
PTPN9P43378 OR4G2P-201ENST00000328113 903 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MIR30E-201ENST00000362104 92 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RNU6-282P-201ENST00000365357 103 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MIR558-201ENST00000384920 94 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MTCO3P40-201ENST00000392516 676 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTPN9P43378 RPL17P50-201ENST00000396131 546 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 Z99755.1-201ENST00000414048 380 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 EIF1P1-201ENST00000421436 341 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms