Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC104629.1-201ENST00000494226 508 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 MTND3P3-201ENST00000505004 126 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC112206.4-201ENST00000515142 405 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AP000889.2-201ENST00000532684 490 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TNFSF9P41273 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF9P41273 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF9P41273 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AC026464.5-201ENST00000562497 722 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AC126365.2-201ENST00000580630 379 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 TPMTP1-201ENST00000592307 737 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AL158827.2-201ENST00000602494 330 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL355877.2-201ENST00000603670 358 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC098826.3-201ENST00000603823 466 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 RPL23AP88-201ENST00000605759 454 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AC009831.4-201ENST00000620744 325 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFSF9P41273 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL138960.2-201ENST00000625145 535 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL159972.1-201ENST00000625150 448 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC126544.2-201ENST00000625174 749 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL691447.3-201ENST00000635020 330 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFSF9P41273 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
TNFSF9P41273 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
TNFSF9P41273 RNU5E-8P-201ENST00000363502 116 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFSF9P41273 AL023284.1-201ENST00000403956 276 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 TPMTP2-201ENST00000414372 726 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.38□□□□□ -2.03
TNFSF9P41273 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFSF9P41273 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFSF9P41273 AL022578.1-201ENST00000439330 1433 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TNFSF9P41273 BMI1P1-201ENST00000445879 941 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TNFSF9P41273 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFSF9P41273 FAM172BP-201ENST00000487497 1089 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 RPL9P6-201ENST00000492764 598 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AIG1P1-201ENST00000503376 148 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF9P41273 AC092436.1-201ENST00000506450 503 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 SUMO2P5-201ENST00000506790 245 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 MRPS36P2-201ENST00000512569 299 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF9P41273 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 RN7SKP40-201ENST00000517211 242 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 RNU6-840P-201ENST00000517275 65 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF9P41273 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF9P41273 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.38□□□□□ -2.03
TNFSF9P41273 SNRPGP18-201ENST00000553000 214 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AL132857.1-201ENST00000555180 708 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC090616.3-201ENST00000582184 217 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 BBIP1P1-201ENST00000602999 279 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC068313.1-201ENST00000604028 1008 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC005014.3-201ENST00000605985 190 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF9P41273 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC140725.3-201ENST00000616193 880 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AL603758.1-201ENST00000618654 241 ntBASIC2.38□□□□□ -2.03
TNFSF9P41273 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFSF9P41273 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
TNFSF9P41273 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
TNFSF9P41273 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 Y_RNA.234-201ENST00000364409 97 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TNFSF9P41273 Y_RNA.408-201ENST00000383987 102 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TNFSF9P41273 HMGB1P17-201ENST00000403495 628 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 HMGB1P11-201ENST00000413899 637 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AC007919.1-201ENST00000429380 217 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC096638.1-201ENST00000444678 216 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFSF9P41273 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 BX322784.1-201ENST00000455793 1077 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AC093752.1-206ENST00000511823 336 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.37□□□□□ -2.03
TNFSF9P41273 EEF1A1P37-201ENST00000522748 715 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 LRRC6P1-201ENST00000532188 885 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFSF9P41273 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TNFSF9P41273 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms