Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCNFP41002 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNFP41002 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNFP41002 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.65□□□□□ -1.66
CCNFP41002 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCNFP41002 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.66
CCNFP41002 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.65□□□□□ -1.66
CCNFP41002 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.66
CCNFP41002 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.65□□□□□ -1.66
CCNFP41002 RNU5A-1-201ENST00000362698 116 ntBASIC4.65□□□□□ -1.67
CCNFP41002 RN7SKP115-201ENST00000363177 317 ntBASIC4.65□□□□□ -1.67
CCNFP41002 RNU6-173P-201ENST00000364215 104 ntBASIC4.65□□□□□ -1.67
CCNFP41002 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCNFP41002 RNU6-331P-201ENST00000384724 107 ntBASIC4.65□□□□□ -1.67
CCNFP41002 MRPL42P3-201ENST00000401492 326 ntBASIC4.65□□□□□ -1.67
CCNFP41002 Y_RNA.625-201ENST00000411256 107 ntBASIC4.65□□□□□ -1.67
CCNFP41002 BX510359.2-201ENST00000417920 305 ntBASIC4.65□□□□□ -1.67
CCNFP41002 EIF4EP1-201ENST00000422311 642 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 IPO7P1-201ENST00000442031 636 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC008264.1-201ENST00000447612 367 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC079168.2-201ENST00000453977 416 ntBASIC4.65□□□□□ -1.67
CCNFP41002 MTATP8P1-201ENST00000467115 207 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AL135752.1-201ENST00000479477 471 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.65□□□□□ -1.67
CCNFP41002 SCARNA22-201ENST00000503991 125 ntBASIC4.65□□□□□ -1.67
CCNFP41002 MLLT10P2-201ENST00000506434 249 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC091868.1-201ENST00000508746 304 ntBASIC4.65□□□□□ -1.67
CCNFP41002 RNU6-914P-201ENST00000516749 109 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AP003122.3-201ENST00000526316 255 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 AC100770.1-201ENST00000532310 322 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.65□□□□□ -1.67
CCNFP41002 AC105129.1-201ENST00000560250 297 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.65□□□□□ -1.67
CCNFP41002 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 AL391358.1-201ENST00000605342 190 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
CCNFP41002 MIR6748-201ENST00000610433 71 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AL049539.1-201ENST00000611964 459 ntBASIC4.65□□□□□ -1.67
CCNFP41002 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.65□□□□□ -1.67
CCNFP41002 MIR7154-201ENST00000620673 73 ntBASIC4.65□□□□□ -1.67
CCNFP41002 PLCE1P1-201ENST00000622094 305 ntBASIC4.65□□□□□ -1.67
CCNFP41002 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.65□□□□□ -1.67
CCNFP41002 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 ZNF285B-201ENST00000561698 1767 ntBASIC4.65□□□□□ -1.67
CCNFP41002 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCNFP41002 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.65□□□□□ -1.67
CCNFP41002 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CCNFP41002 AC009812.4-201ENST00000569134 1805 ntBASIC4.65□□□□□ -1.67
CCNFP41002 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCNFP41002 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CCNFP41002 ZNF807-201ENST00000328088 1707 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCNFP41002 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNFP41002 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 SNORD62.1-201ENST00000362541 86 ntBASIC4.64□□□□□ -1.67
CCNFP41002 RNU6-1181P-201ENST00000384191 106 ntBASIC4.64□□□□□ -1.67
CCNFP41002 Y_RNA.463-201ENST00000384271 102 ntBASIC4.64□□□□□ -1.67
CCNFP41002 Y_RNA.527-201ENST00000384573 102 ntBASIC4.64□□□□□ -1.67
CCNFP41002 RNU1-82P-201ENST00000390851 165 ntBASIC4.64□□□□□ -1.67
CCNFP41002 RNU6-328P-201ENST00000390887 106 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AC097374.1-203ENST00000400783 485 ntBASIC4.64□□□□□ -1.67
CCNFP41002 RN7SKP100-201ENST00000411258 284 ntBASIC4.64□□□□□ -1.67
CCNFP41002 Z99755.1-201ENST00000414048 380 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNFP41002 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.64□□□□□ -1.67
CCNFP41002 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 RSL24D1P6-201ENST00000426934 401 ntBASIC4.64□□□□□ -1.67
CCNFP41002 MTATP6P4-201ENST00000427725 675 ntBASIC4.64□□□□□ -1.67
CCNFP41002 USP9YP30-201ENST00000430729 455 ntBASIC4.64□□□□□ -1.67
CCNFP41002 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.64□□□□□ -1.67
CCNFP41002 RPL5P30-201ENST00000465511 891 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AC092324.1-201ENST00000468671 324 ntBASIC4.64□□□□□ -1.67
CCNFP41002 RPS15AP34-201ENST00000487776 387 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AL049874.1-201ENST00000489560 388 ntBASIC4.64□□□□□ -1.67
CCNFP41002 OR51K1P-201ENST00000510214 950 ntBASIC4.64□□□□□ -1.67
CCNFP41002 SNORA25.10-201ENST00000515926 124 ntBASIC4.64□□□□□ -1.67
CCNFP41002 SNORA31.3-201ENST00000516029 96 ntBASIC4.64□□□□□ -1.67
CCNFP41002 IGKV1-32-201ENST00000519290 311 ntBASIC4.64□□□□□ -1.67
CCNFP41002 COX6CP5-201ENST00000527162 228 ntBASIC4.64□□□□□ -1.67
CCNFP41002 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.64□□□□□ -1.67
CCNFP41002 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.64□□□□□ -1.67
CCNFP41002 AL352979.3-201ENST00000553515 247 ntBASIC4.64□□□□□ -1.67
CCNFP41002 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.64□□□□□ -1.67
CCNFP41002 FAM60BP-201ENST00000578364 658 ntBASIC4.64□□□□□ -1.67
CCNFP41002 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.64□□□□□ -1.67
CCNFP41002 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.64□□□□□ -1.67
CCNFP41002 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.64□□□□□ -1.67
CCNFP41002 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCNFP41002 AL136164.3-201ENST00000624429 3978 ntBASIC4.64□□□□□ -1.67
CCNFP41002 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCNFP41002 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCNFP41002 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms