Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC128657.1-201ENST00000549459 145 ntBASIC3.39□□□□□ -1.87
HADHAP40939 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.39□□□□□ -1.87
HADHAP40939 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
HADHAP40939 CKS1BP3-201ENST00000600888 237 ntBASIC3.39□□□□□ -1.87
HADHAP40939 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.39□□□□□ -1.87
HADHAP40939 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.39□□□□□ -1.87
HADHAP40939 AC025594.3-201ENST00000613068 790 ntBASIC3.39□□□□□ -1.87
HADHAP40939 SNORD39.4-201ENST00000620099 78 ntBASIC3.39□□□□□ -1.87
HADHAP40939 AC099654.13-201ENST00000639774 207 ntBASIC3.39□□□□□ -1.87
HADHAP40939 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HADHAP40939 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HADHAP40939 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HADHAP40939 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
HADHAP40939 ELL2P3-201ENST00000457883 1602 ntBASIC3.38□□□□□ -1.87
HADHAP40939 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
HADHAP40939 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.38□□□□□ -1.87
HADHAP40939 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
HADHAP40939 AC091390.3-201ENST00000426478 338 ntBASIC3.38□□□□□ -1.87
HADHAP40939 Z83846.1-201ENST00000446798 265 ntBASIC3.38□□□□□ -1.87
HADHAP40939 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.38□□□□□ -1.87
HADHAP40939 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
HADHAP40939 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.38□□□□□ -1.87
HADHAP40939 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.38□□□□□ -1.87
HADHAP40939 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.38□□□□□ -1.87
HADHAP40939 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.38□□□□□ -1.87
HADHAP40939 Y_RNA.672-201ENST00000516289 104 ntBASIC3.38□□□□□ -1.87
HADHAP40939 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
HADHAP40939 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HADHAP40939 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.38□□□□□ -1.87
HADHAP40939 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
HADHAP40939 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.38□□□□□ -1.87
HADHAP40939 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.38□□□□□ -1.87
HADHAP40939 AC012468.1-201ENST00000604888 430 ntBASIC3.38□□□□□ -1.87
HADHAP40939 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
HADHAP40939 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.38□□□□□ -1.87
HADHAP40939 AL355365.1-201ENST00000616480 294 ntBASIC3.38□□□□□ -1.87
HADHAP40939 AL356321.1-201ENST00000621360 228 ntBASIC3.38□□□□□ -1.87
HADHAP40939 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.38□□□□□ -1.87
HADHAP40939 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HADHAP40939 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HADHAP40939 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
HADHAP40939 RNU6-511P-201ENST00000363496 107 ntBASIC3.37□□□□□ -1.87
HADHAP40939 RNY4P16-201ENST00000364768 94 ntBASIC3.37□□□□□ -1.87
HADHAP40939 RNU6-1027P-201ENST00000383998 107 ntBASIC3.37□□□□□ -1.87
HADHAP40939 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 HMGN1P14-201ENST00000412459 517 ntBASIC3.37□□□□□ -1.87
HADHAP40939 SEPT2P1-201ENST00000419651 180 ntBASIC3.37□□□□□ -1.87
HADHAP40939 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AL158156.1-201ENST00000422509 473 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.37□□□□□ -1.87
HADHAP40939 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.37□□□□□ -1.87
HADHAP40939 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 HMGB3P11-201ENST00000440127 604 ntBASIC3.37□□□□□ -1.87
HADHAP40939 PGBD4P3-201ENST00000440731 581 ntBASIC3.37□□□□□ -1.87
HADHAP40939 Z99127.3-201ENST00000448158 395 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AL033528.1-201ENST00000453780 140 ntBASIC3.37□□□□□ -1.87
HADHAP40939 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.37□□□□□ -1.87
HADHAP40939 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 RPL37P6-201ENST00000460682 294 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
HADHAP40939 RBM43P1-201ENST00000476891 1081 ntBASIC3.37□□□□□ -1.87
HADHAP40939 RN7SL432P-201ENST00000484057 298 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.37□□□□□ -1.87
HADHAP40939 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
HADHAP40939 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AC015917.1-201ENST00000579654 510 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC005771.1-201ENST00000585581 349 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC009977.1-201ENST00000586015 570 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 GLUD1P4-201ENST00000590914 418 ntBASIC3.37□□□□□ -1.87
HADHAP40939 U73023.1-201ENST00000603134 700 ntBASIC3.37□□□□□ -1.87
HADHAP40939 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.37□□□□□ -1.87
HADHAP40939 AL391813.2-201ENST00000609113 322 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC073114.1-201ENST00000612027 490 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.37□□□□□ -1.87
HADHAP40939 AC026422.1-201ENST00000623961 452 ntBASIC3.37□□□□□ -1.87
HADHAP40939 AL603839.4-201ENST00000624658 1005 ntBASIC3.37□□□□□ -1.87
HADHAP40939 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.37□□□□□ -1.87
HADHAP40939 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HADHAP40939 AC010680.1-201ENST00000590024 3590 ntBASIC3.37□□□□□ -1.87
HADHAP40939 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HADHAP40939 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
HADHAP40939 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HADHAP40939 HSPE1P11-201ENST00000339579 310 ntBASIC3.36□□□□□ -1.87
HADHAP40939 Y_RNA.77-201ENST00000362962 107 ntBASIC3.36□□□□□ -1.87
HADHAP40939 U3.4-201ENST00000363352 213 ntBASIC3.36□□□□□ -1.87
HADHAP40939 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HADHAP40939 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms