Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RPS3AP44-201ENST00000425466 790 ntBASIC1.18□□□□□ -2.22
SNCAP37840 RPL36P19-201ENST00000430744 301 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC092573.2-201ENST00000434546 243 ntBASIC1.18□□□□□ -2.22
SNCAP37840 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.18□□□□□ -2.22
SNCAP37840 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.18□□□□□ -2.22
SNCAP37840 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.18□□□□□ -2.22
SNCAP37840 AMD1P1-201ENST00000457220 922 ntBASIC1.18□□□□□ -2.22
SNCAP37840 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.18□□□□□ -2.22
SNCAP37840 AC005410.1-202ENST00000460347 485 ntBASIC1.18□□□□□ -2.22
SNCAP37840 MTND4LP3-201ENST00000468320 276 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC107398.1-201ENST00000486904 505 ntBASIC1.18□□□□□ -2.22
SNCAP37840 KATNBL1P4-201ENST00000503545 918 ntBASIC1.18□□□□□ -2.22
SNCAP37840 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.18□□□□□ -2.22
SNCAP37840 RNU5F-8P-201ENST00000515941 111 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.18□□□□□ -2.22
SNCAP37840 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.18□□□□□ -2.22
SNCAP37840 AC010186.2-204ENST00000537668 439 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC068135.2-201ENST00000569293 1028 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.18□□□□□ -2.22
SNCAP37840 AL078605.1-201ENST00000603529 500 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AL035411.2-201ENST00000604022 421 ntBASIC1.18□□□□□ -2.22
SNCAP37840 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.18□□□□□ -2.22
SNCAP37840 AC007038.2-201ENST00000608095 740 ntBASIC1.18□□□□□ -2.22
SNCAP37840 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.18□□□□□ -2.22
SNCAP37840 AC010872.1-201ENST00000624225 675 ntBASIC1.18□□□□□ -2.22
SNCAP37840 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.18□□□□□ -2.22
SNCAP37840 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.18□□□□□ -2.22
SNCAP37840 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
SNCAP37840 AC008568.2-201ENST00000623862 2313 ntBASIC1.17□□□□□ -2.22
SNCAP37840 RNU6-98P-201ENST00000384173 107 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AL033519.2-201ENST00000403958 392 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.17□□□□□ -2.22
SNCAP37840 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.17□□□□□ -2.22
SNCAP37840 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.17□□□□□ -2.22
SNCAP37840 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.17□□□□□ -2.22
SNCAP37840 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SNCAP37840 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.17□□□□□ -2.22
SNCAP37840 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.17□□□□□ -2.22
SNCAP37840 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
SNCAP37840 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SNCAP37840 AC008676.3-201ENST00000521237 435 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.17□□□□□ -2.22
SNCAP37840 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.17□□□□□ -2.22
SNCAP37840 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.17□□□□□ -2.22
SNCAP37840 AC010615.3-201ENST00000597319 394 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AC243960.4-201ENST00000600532 288 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AL161722.3-201ENST00000605789 2983 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AL773524.1-201ENST00000614065 229 ntBASIC1.17□□□□□ -2.22
SNCAP37840 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.17□□□□□ -2.22
SNCAP37840 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.16□□□□□ -2.22
SNCAP37840 RNU6-1226P-201ENST00000384317 107 ntBASIC1.16□□□□□ -2.22
SNCAP37840 RNU6-1035P-201ENST00000384477 107 ntBASIC1.16□□□□□ -2.22
SNCAP37840 SNORA26.9-201ENST00000391322 122 ntBASIC1.16□□□□□ -2.22
SNCAP37840 MIR934-201ENST00000401241 83 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.16□□□□□ -2.22
SNCAP37840 AC244453.4-201ENST00000419150 388 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AC246680.2-201ENST00000422106 389 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.16□□□□□ -2.22
SNCAP37840 AC244035.1-201ENST00000430042 390 ntBASIC1.16□□□□□ -2.22
SNCAP37840 MICF-203ENST00000432679 129 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.16□□□□□ -2.22
SNCAP37840 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.16□□□□□ -2.22
SNCAP37840 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.16□□□□□ -2.22
SNCAP37840 FABP5P3-201ENST00000437960 408 ntBASIC1.16□□□□□ -2.22
SNCAP37840 HMGB1P18-201ENST00000438801 619 ntBASIC1.16□□□□□ -2.22
SNCAP37840 HMGN2P10-201ENST00000448085 265 ntBASIC1.16□□□□□ -2.22
SNCAP37840 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.16□□□□□ -2.22
SNCAP37840 AC104629.2-201ENST00000468627 598 ntBASIC1.16□□□□□ -2.22
SNCAP37840 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.16□□□□□ -2.22
SNCAP37840 AC109464.2-201ENST00000510242 943 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AC008837.1-201ENST00000511513 412 ntBASIC1.16□□□□□ -2.22
SNCAP37840 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.16□□□□□ -2.22
SNCAP37840 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.16□□□□□ -2.22
SNCAP37840 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
SNCAP37840 AL442163.2-201ENST00000553912 710 ntBASIC1.16□□□□□ -2.22
SNCAP37840 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.16□□□□□ -2.22
SNCAP37840 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.16□□□□□ -2.22
SNCAP37840 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNCAP37840 RNU6-173P-201ENST00000364215 104 ntBASIC1.15□□□□□ -2.23
SNCAP37840 RNA5SP125-201ENST00000364843 120 ntBASIC1.15□□□□□ -2.23
SNCAP37840 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.15□□□□□ -2.23
SNCAP37840 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AL354695.1-201ENST00000427935 228 ntBASIC1.15□□□□□ -2.23
SNCAP37840 GTF2IP7-202ENST00000436677 309 ntBASIC1.15□□□□□ -2.23
SNCAP37840 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.15□□□□□ -2.23
SNCAP37840 BNIP3P2-201ENST00000441221 577 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.15□□□□□ -2.23
SNCAP37840 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.15□□□□□ -2.23
SNCAP37840 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.15□□□□□ -2.23
SNCAP37840 AC111193.1-201ENST00000504097 155 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.15□□□□□ -2.23
SNCAP37840 AC067904.2-201ENST00000517322 1283 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.15□□□□□ -2.23
SNCAP37840 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
SNCAP37840 MIR3683-201ENST00000580847 82 ntBASIC1.15□□□□□ -2.23
SNCAP37840 MIR4513-201ENST00000581077 86 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms