Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCLP35914 MTND5P4-201ENST00000514978 288 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 ERHP1-201ENST00000523006 310 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HMGCLP35914 AC013828.2-201ENST00000532487 235 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.8□□□□□ -1.96
HMGCLP35914 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCLP35914 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCLP35914 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.8□□□□□ -1.96
HMGCLP35914 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCLP35914 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCLP35914 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCLP35914 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 AC011451.2-201ENST00000604303 598 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 AF246928.1-201ENST00000623768 87 ntBASIC2.8□□□□□ -1.96
HMGCLP35914 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCLP35914 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCLP35914 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCLP35914 FRG1BP-201ENST00000278882 761 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 SNORA18.3-201ENST00000384122 132 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 SSXP9-201ENST00000417503 292 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC079780.1-201ENST00000428259 207 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC244035.1-201ENST00000430042 390 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 RPL37P21-201ENST00000435890 276 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC090774.1-201ENST00000435925 246 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 RABEPKP1-201ENST00000440529 1026 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCLP35914 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCLP35914 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCLP35914 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 SNORA31.22-201ENST00000517204 135 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCLP35914 CYCSP39-201ENST00000565821 309 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 ROCK1P1-201ENST00000573767 549 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCLP35914 OR4K8P-201ENST00000578842 1048 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 TUG1_1.1-201ENST00000610654 145 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HMGCLP35914 AL356266.1-201ENST00000623311 483 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AL138713.1-201ENST00000624026 2130 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGCLP35914 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HMGCLP35914 AC011460.1-201ENST00000636268 1834 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
HMGCLP35914 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCLP35914 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
HMGCLP35914 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCLP35914 Y_RNA.560-201ENST00000384689 102 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 RNU2-43P-201ENST00000410306 190 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 CYCSP46-201ENST00000423569 204 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC004866.2-201ENST00000438285 481 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 BMI1P1-201ENST00000445879 941 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 KATNBL1P6-201ENST00000453433 915 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 ZNF114P1-201ENST00000453500 292 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 AP1S2P1-201ENST00000457344 379 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCLP35914 AC097462.2-201ENST00000504623 481 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCLP35914 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 SNORA31.8-201ENST00000516327 108 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 RNU6-201P-201ENST00000517100 61 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC103783.1-201ENST00000520506 373 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AL356057.1-201ENST00000533798 831 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCLP35914 AC125611.2-201ENST00000551907 647 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AP005136.1-201ENST00000579765 429 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCLP35914 AC006504.3-201ENST00000586818 523 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCLP35914 BNIP3P23-201ENST00000599655 511 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC012443.1-201ENST00000605605 231 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC138749.5-201ENST00000611461 208 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC116165.2-201ENST00000616705 206 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AC092140.2-201ENST00000618027 521 ntBASIC2.78□□□□□ -1.96
HMGCLP35914 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCLP35914 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCLP35914 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms