Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN4AP35499 OR4P1P-201ENST00000530808 1136 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.27□□□□□ -2.05
SCN4AP35499 AC005832.3-201ENST00000537929 631 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN4AP35499 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN4AP35499 AL158050.2-201ENST00000605336 568 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AL158163.2-201ENST00000619110 700 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AP002782.1-201ENST00000623107 614 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN4AP35499 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
SCN4AP35499 KPNA2P1-201ENST00000458289 1591 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 Y_RNA.25-201ENST00000362528 102 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 SUGT1P1-201ENST00000379514 476 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCN4AP35499 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 SUMO1P4-201ENST00000429430 302 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 RPL36P19-201ENST00000430744 301 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 MTND4LP10-201ENST00000435146 291 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC092393.1-201ENST00000439625 742 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 SEPT14P24-201ENST00000447236 180 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 MTCO1P48-201ENST00000448024 1096 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 MTCYBP16-201ENST00000509187 1129 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN4AP35499 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.26□□□□□ -2.05
SCN4AP35499 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN4AP35499 AL163153.1-201ENST00000554223 283 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 AC104072.1-201ENST00000568817 668 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC138915.2-201ENST00000569776 97 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC004987.4-201ENST00000603383 338 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC090116.1-201ENST00000615679 446 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC010975.3-201ENST00000618727 978 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCN4AP35499 AC016716.1-201ENST00000265882 708 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 Y_RNA.472-201ENST00000384322 102 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 RNU2-28P-201ENST00000410457 189 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 RPL21P32-201ENST00000419877 477 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 AL035410.1-201ENST00000427409 427 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 MTCO1P3-201ENST00000429327 192 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN4AP35499 HMGB1P31-201ENST00000437242 427 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 MTND4P6-201ENST00000438297 472 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 DNAJC19P4-201ENST00000440115 345 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 OR10R1P-201ENST00000441524 1141 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 RPL39P6-201ENST00000448289 150 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 NDUFA5P7-201ENST00000452914 242 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 AC114322.1-201ENST00000506771 926 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN4AP35499 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 AC091163.3-201ENST00000518269 1144 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 HSPA8P13-201ENST00000523715 472 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 SNRPGP16-201ENST00000533275 226 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN4AP35499 AC125611.1-201ENST00000549563 229 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCN4AP35499 ACTR3BP3-201ENST00000565577 979 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AL512347.1-201ENST00000566420 503 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN4AP35499 AP005136.1-201ENST00000579765 429 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC090616.5-202ENST00000582111 297 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 VN1R87P-201ENST00000596706 487 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC009220.3-201ENST00000604318 586 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC112220.2-201ENST00000605513 533 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AC055876.5-201ENST00000605667 259 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
SCN4AP35499 ZNF734P-201ENST00000419494 1534 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 MTND4P34-201ENST00000572715 1371 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN4AP35499 SNORA7.2-201ENST00000364446 145 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 RNU6-298P-201ENST00000390888 96 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AC018630.2-202ENST00000422992 927 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN4AP35499 BX322784.1-201ENST00000455793 1077 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 RPS29P12-201ENST00000460178 152 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN4AP35499 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 MTND3P3-201ENST00000505004 126 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AC112198.4-201ENST00000515450 351 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 SNORA31.8-201ENST00000516327 108 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN4AP35499 MTCO1P40-201ENST00000574371 625 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 MIR6504-201ENST00000613520 61 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms