Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HOXC13P31276 RNU6-1316P-201ENST00000384242 108 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 RNY3P14-201ENST00000384309 102 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 RNA5SP229-201ENST00000410809 99 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AL593851.1-201ENST00000426171 157 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC104332.2-201ENST00000429959 156 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC13P31276 AC129850.1-201ENST00000436203 508 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC13P31276 AC009237.8-201ENST00000445492 379 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXC13P31276 MTND1P9-201ENST00000453775 944 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC010099.1-201ENST00000455434 375 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 BZW1P2-201ENST00000473537 826 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC021382.1-201ENST00000483523 359 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC010424.1-201ENST00000506336 297 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC13P31276 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC13P31276 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXC13P31276 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC13P31276 RPL23AP84-201ENST00000571193 464 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 MIR4513-201ENST00000581077 86 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC091135.1-201ENST00000585943 307 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 U73023.1-201ENST00000603134 700 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC108747.1-201ENST00000609508 535 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC008443.7-201ENST00000622195 246 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC079248.2-201ENST00000623779 326 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC007494.3-201ENST00000624660 743 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC13P31276 ZNF519P1-201ENST00000449011 1626 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC13P31276 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC13P31276 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC13P31276 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC13P31276 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC13P31276 RNU6-1078P-201ENST00000364522 103 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 RNU6-76P-201ENST00000384060 104 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HOXC13P31276 RPL7P10-201ENST00000417407 739 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC13P31276 MTND4P28-201ENST00000426217 387 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 RPL23AP69-201ENST00000431134 458 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 OR4K11P-201ENST00000431829 904 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC13P31276 AC090774.1-201ENST00000435925 246 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 UBE2V1P13-201ENST00000436983 439 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC112653.1-201ENST00000443851 386 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC13P31276 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 RPS3AP14-201ENST00000483907 780 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC13P31276 AP001025.2-201ENST00000490908 477 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC13P31276 AC009901.1-201ENST00000506703 541 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 APOOP4-201ENST00000513530 597 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC026801.2-201ENST00000515352 425 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 SNORA31.21-201ENST00000517180 77 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC13P31276 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 AC125611.2-201ENST00000551907 647 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
HOXC13P31276 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC13P31276 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 HMGB1P6-201ENST00000569046 646 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC13P31276 AL356055.1-201ENST00000602528 446 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC073657.2-201ENST00000605661 303 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC122133.1-201ENST00000613964 233 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 AC002064.3-201ENST00000623448 346 ntBASIC3.42□□□□□ -1.86
HOXC13P31276 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HOXC13P31276 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC13P31276 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC13P31276 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC13P31276 RNU6-1283P-201ENST00000365314 105 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 Y_RNA.516-201ENST00000384541 124 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 SNORA44-201ENST00000384584 132 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 Y_RNA.548-201ENST00000384656 105 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC13P31276 RN7SKP220-201ENST00000410611 288 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AL139415.2-201ENST00000431968 163 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 MTND1P32-201ENST00000433043 938 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 MTAPP1-201ENST00000489154 819 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC13P31276 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC13P31276 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HOXC13P31276 MTCYBP43-201ENST00000513621 740 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC034159.1-201ENST00000513885 583 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC13P31276 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC13P31276 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms