Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AL359385.1-201ENST00000456509 365 ntBASIC2.54□□□□□ -2
HOXA9P31269 MTND1P16-201ENST00000465177 898 ntBASIC2.54□□□□□ -2
HOXA9P31269 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AC109445.1-201ENST00000512356 383 ntBASIC2.54□□□□□ -2
HOXA9P31269 MTND5P4-201ENST00000514978 288 ntBASIC2.54□□□□□ -2
HOXA9P31269 RNU6-237P-201ENST00000515985 71 ntBASIC2.54□□□□□ -2
HOXA9P31269 RN7SKP265-201ENST00000516448 223 ntBASIC2.54□□□□□ -2
HOXA9P31269 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
HOXA9P31269 MRPS36P3-201ENST00000519284 130 ntBASIC2.54□□□□□ -2
HOXA9P31269 HSPA8P13-201ENST00000523715 472 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AL512347.1-201ENST00000566420 503 ntBASIC2.54□□□□□ -2
HOXA9P31269 VN1R78P-201ENST00000597393 564 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 AC104763.2-201ENST00000604179 382 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC034229.4-201ENST00000607861 441 ntBASIC2.54□□□□□ -2
HOXA9P31269 AP000484.1-201ENST00000620067 1252 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC004009.2-201ENST00000623016 728 ntBASIC2.54□□□□□ -2
HOXA9P31269 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA9P31269 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA9P31269 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXA9P31269 RNU6-343P-201ENST00000364709 104 ntBASIC2.53□□□□□ -2
HOXA9P31269 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
HOXA9P31269 SNORD51-201ENST00000384320 80 ntBASIC2.53□□□□□ -2
HOXA9P31269 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
HOXA9P31269 ANAPC10P1-201ENST00000395991 556 ntBASIC2.53□□□□□ -2
HOXA9P31269 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 MTCO1P39-201ENST00000426148 480 ntBASIC2.53□□□□□ -2
HOXA9P31269 AL590233.1-201ENST00000430017 456 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 Z73417.1-201ENST00000447373 778 ntBASIC2.53□□□□□ -2
HOXA9P31269 MTND2P19-201ENST00000449129 1012 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 AC010099.1-201ENST00000455434 375 ntBASIC2.53□□□□□ -2
HOXA9P31269 snoU109.4-201ENST00000458953 143 ntBASIC2.53□□□□□ -2
HOXA9P31269 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.53□□□□□ -2
HOXA9P31269 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.53□□□□□ -2
HOXA9P31269 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.53□□□□□ -2
HOXA9P31269 TBCAP3-201ENST00000512475 312 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
HOXA9P31269 RNA5SP471-201ENST00000516971 106 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.53□□□□□ -2
HOXA9P31269 EEF1A1P37-201ENST00000522748 715 ntBASIC2.53□□□□□ -2
HOXA9P31269 OR5AK1P-201ENST00000524837 922 ntBASIC2.53□□□□□ -2
HOXA9P31269 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.53□□□□□ -2
HOXA9P31269 DEFB131D-201ENST00000526803 184 ntBASIC2.53□□□□□ -2
HOXA9P31269 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.53□□□□□ -2
HOXA9P31269 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.53□□□□□ -2
HOXA9P31269 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
HOXA9P31269 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
HOXA9P31269 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
HOXA9P31269 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC061975.8-201ENST00000587058 721 ntBASIC2.53□□□□□ -2
HOXA9P31269 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 AC097478.2-201ENST00000610572 514 ntBASIC2.53□□□□□ -2
HOXA9P31269 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
HOXA9P31269 AC009159.1-201ENST00000618386 642 ntBASIC2.53□□□□□ -2
HOXA9P31269 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
HOXA9P31269 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
HOXA9P31269 AC006927.4-201ENST00000639187 543 ntBASIC2.53□□□□□ -2
HOXA9P31269 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
HOXA9P31269 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXA9P31269 AC092881.1-201ENST00000638218 2733 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 AC008669.1-201ENST00000565823 2178 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 OR56A5-201ENST00000340110 738 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RNU6-878P-201ENST00000384578 110 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HOXA9P31269 RNU6-952P-201ENST00000391164 108 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RNA5SP354-201ENST00000391247 136 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXA9P31269 HMGB1P17-201ENST00000403495 628 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 MIR1284-201ENST00000408337 120 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RNU6-757P-201ENST00000410334 100 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RNU6-193P-201ENST00000410977 107 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 TPMTP2-201ENST00000414372 726 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 AL008987.1-201ENST00000415528 237 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RPL22P18-201ENST00000417197 377 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA9P31269 AL139421.1-201ENST00000423010 169 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 MTCYBP45-201ENST00000435243 565 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RPS25P9-201ENST00000435591 252 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HOXA9P31269 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXA9P31269 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 AC008571.1-201ENST00000467232 300 ntBASIC2.52□□□□□ -2.01
HOXA9P31269 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms