Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL117339.3-201ENST00000418733 162 ntBASIC5.48□□□□□ -1.53
VARSP26640 MTCO1P39-201ENST00000426148 480 ntBASIC5.48□□□□□ -1.53
VARSP26640 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.48□□□□□ -1.53
VARSP26640 AL162725.1-201ENST00000435405 301 ntBASIC5.48□□□□□ -1.53
VARSP26640 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.48□□□□□ -1.53
VARSP26640 SNORD125-201ENST00000459538 96 ntBASIC5.48□□□□□ -1.53
VARSP26640 RPL23AP45-201ENST00000476406 468 ntBASIC5.48□□□□□ -1.53
VARSP26640 OR2AO1P-201ENST00000476497 403 ntBASIC5.48□□□□□ -1.53
VARSP26640 OR7H2P-201ENST00000513483 306 ntBASIC5.48□□□□□ -1.53
VARSP26640 RN7SKP272-201ENST00000516988 232 ntBASIC5.48□□□□□ -1.53
VARSP26640 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.48□□□□□ -1.53
VARSP26640 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.48□□□□□ -1.53
VARSP26640 HMGB1P14-201ENST00000557424 591 ntBASIC5.48□□□□□ -1.53
VARSP26640 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.48□□□□□ -1.53
VARSP26640 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.48□□□□□ -1.53
VARSP26640 MIR4308-201ENST00000580634 81 ntBASIC5.48□□□□□ -1.53
VARSP26640 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.48□□□□□ -1.53
VARSP26640 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.48□□□□□ -1.53
VARSP26640 AC090607.5-201ENST00000615692 224 ntBASIC5.48□□□□□ -1.53
VARSP26640 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.48□□□□□ -1.53
VARSP26640 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.48□□□□□ -1.53
VARSP26640 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VARSP26640 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.48□□□□□ -1.53
VARSP26640 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
VARSP26640 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.48□□□□□ -1.53
VARSP26640 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VARSP26640 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VARSP26640 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.47□□□□□ -1.53
VARSP26640 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 SNORA64.1-201ENST00000362600 132 ntBASIC5.47□□□□□ -1.53
VARSP26640 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
VARSP26640 SNORA70.6-201ENST00000383934 134 ntBASIC5.47□□□□□ -1.53
VARSP26640 RNU6-44P-201ENST00000384045 107 ntBASIC5.47□□□□□ -1.53
VARSP26640 Y_RNA.435-201ENST00000384095 112 ntBASIC5.47□□□□□ -1.53
VARSP26640 Y_RNA.488-201ENST00000384403 102 ntBASIC5.47□□□□□ -1.53
VARSP26640 MIR301A-201ENST00000385261 86 ntBASIC5.47□□□□□ -1.53
VARSP26640 Y_RNA.580-201ENST00000391004 95 ntBASIC5.47□□□□□ -1.53
VARSP26640 EIF4A1P3-201ENST00000411521 244 ntBASIC5.47□□□□□ -1.53
VARSP26640 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.47□□□□□ -1.53
VARSP26640 RPS29P27-201ENST00000463711 170 ntBASIC5.47□□□□□ -1.53
VARSP26640 AP001025.1-201ENST00000486139 332 ntBASIC5.47□□□□□ -1.53
VARSP26640 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.47□□□□□ -1.53
VARSP26640 RNU5F-8P-201ENST00000515941 111 ntBASIC5.47□□□□□ -1.53
VARSP26640 IGLV3-24-201ENST00000517477 197 ntBASIC5.47□□□□□ -1.53
VARSP26640 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.47□□□□□ -1.53
VARSP26640 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.47□□□□□ -1.53
VARSP26640 SRGNP1-201ENST00000603392 451 ntBASIC5.47□□□□□ -1.53
VARSP26640 AC084757.4-201ENST00000616350 526 ntBASIC5.47□□□□□ -1.53
VARSP26640 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
VARSP26640 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VARSP26640 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.47□□□□□ -1.53
VARSP26640 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARSP26640 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
VARSP26640 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.47□□□□□ -1.53
VARSP26640 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
VARSP26640 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VARSP26640 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.53
VARSP26640 ZNF826P-207ENST00000622273 1910 ntBASIC5.46□□□□□ -1.53
VARSP26640 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
VARSP26640 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VARSP26640 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
VARSP26640 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARSP26640 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VARSP26640 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.46□□□□□ -1.54
VARSP26640 RNU6-222P-201ENST00000362438 107 ntBASIC5.46□□□□□ -1.54
VARSP26640 Y_RNA.33-201ENST00000362591 102 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNU6-512P-201ENST00000364438 103 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNU6-215P-201ENST00000365169 102 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNA5SP223-201ENST00000365174 120 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNU6-395P-201ENST00000365662 106 ntBASIC5.46□□□□□ -1.54
VARSP26640 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARSP26640 RNU6-1289P-201ENST00000384431 106 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNU6-21P-201ENST00000384710 107 ntBASIC5.46□□□□□ -1.54
VARSP26640 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VARSP26640 AC005042.1-201ENST00000393397 800 ntBASIC5.46□□□□□ -1.54
VARSP26640 HSPA8P15-201ENST00000401676 786 ntBASIC5.46□□□□□ -1.54
VARSP26640 RNU5E-9P-201ENST00000411164 104 ntBASIC5.46□□□□□ -1.54
VARSP26640 GPS2P1-201ENST00000411761 986 ntBASIC5.46□□□□□ -1.54
VARSP26640 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.46□□□□□ -1.54
VARSP26640 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.46□□□□□ -1.54
VARSP26640 RPS6P12-201ENST00000432491 726 ntBASIC5.46□□□□□ -1.54
VARSP26640 LINC02210-201ENST00000444561 288 ntBASIC5.46□□□□□ -1.54
VARSP26640 IGHV5-78-201ENST00000450948 295 ntBASIC5.46□□□□□ -1.54
VARSP26640 RN7SL799P-201ENST00000475891 298 ntBASIC5.46□□□□□ -1.54
VARSP26640 SNORA31.22-201ENST00000517204 135 ntBASIC5.46□□□□□ -1.54
VARSP26640 ATP5F1P5-201ENST00000526403 760 ntBASIC5.46□□□□□ -1.54
VARSP26640 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.46□□□□□ -1.54
VARSP26640 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.46□□□□□ -1.54
VARSP26640 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms