Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 CDC27P3-201ENST00000635418 1910 ntBASIC5.47□□□□□ -1.53
RFX1P22670 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 Y_RNA.245-201ENST00000364493 95 ntBASIC5.47□□□□□ -1.53
RFX1P22670 RPS16P5-201ENST00000406501 404 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AC096664.2-201ENST00000411843 406 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 AL158071.1-201ENST00000430315 461 ntBASIC5.47□□□□□ -1.53
RFX1P22670 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AL731563.1-201ENST00000442202 214 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AL354714.3-201ENST00000447284 493 ntBASIC5.47□□□□□ -1.53
RFX1P22670 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX1P22670 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX1P22670 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX1P22670 RNU6-1256P-201ENST00000516539 103 ntBASIC5.47□□□□□ -1.53
RFX1P22670 Y_RNA.721-201ENST00000517207 102 ntBASIC5.47□□□□□ -1.53
RFX1P22670 TOMM20P2-201ENST00000540082 421 ntBASIC5.47□□□□□ -1.53
RFX1P22670 CPDP1-201ENST00000579660 283 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX1P22670 AC234771.5-201ENST00000600161 514 ntBASIC5.47□□□□□ -1.53
RFX1P22670 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
RFX1P22670 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.47□□□□□ -1.53
RFX1P22670 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX1P22670 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFX1P22670 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFX1P22670 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RFX1P22670 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX1P22670 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX1P22670 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFX1P22670 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RFX1P22670 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RFX1P22670 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.46□□□□□ -1.53
RFX1P22670 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 RNU2-33P-201ENST00000410344 192 ntBASIC5.46□□□□□ -1.54
RFX1P22670 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.46□□□□□ -1.54
RFX1P22670 AL590139.1-201ENST00000416267 400 ntBASIC5.46□□□□□ -1.54
RFX1P22670 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 CYP4F29P-201ENST00000420685 446 ntBASIC5.46□□□□□ -1.54
RFX1P22670 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX1P22670 AL590383.1-201ENST00000428602 75 ntBASIC5.46□□□□□ -1.54
RFX1P22670 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.46□□□□□ -1.54
RFX1P22670 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX1P22670 BTF3P6-201ENST00000448054 499 ntBASIC5.46□□□□□ -1.54
RFX1P22670 RNU6-1037P-201ENST00000459571 107 ntBASIC5.46□□□□□ -1.54
RFX1P22670 AP000942.1-201ENST00000463969 747 ntBASIC5.46□□□□□ -1.54
RFX1P22670 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 AP002404.1-201ENST00000532005 451 ntBASIC5.46□□□□□ -1.54
RFX1P22670 AC110588.1-201ENST00000559699 137 ntBASIC5.46□□□□□ -1.54
RFX1P22670 AC093591.2-201ENST00000565254 3843 ntBASIC5.46□□□□□ -1.54
RFX1P22670 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.46□□□□□ -1.54
RFX1P22670 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX1P22670 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX1P22670 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 Y_RNA.153-201ENST00000363615 91 ntBASIC5.45□□□□□ -1.54
RFX1P22670 RNU6-741P-201ENST00000383889 107 ntBASIC5.45□□□□□ -1.54
RFX1P22670 RNU6-1279P-201ENST00000383917 103 ntBASIC5.45□□□□□ -1.54
RFX1P22670 Y_RNA.389-201ENST00000383924 113 ntBASIC5.45□□□□□ -1.54
RFX1P22670 RNU6-505P-201ENST00000384427 107 ntBASIC5.45□□□□□ -1.54
RFX1P22670 SNORA77-201ENST00000408716 125 ntBASIC5.45□□□□□ -1.54
RFX1P22670 RN7SKP114-201ENST00000410327 279 ntBASIC5.45□□□□□ -1.54
RFX1P22670 RNU2-23P-201ENST00000410545 195 ntBASIC5.45□□□□□ -1.54
RFX1P22670 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX1P22670 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX1P22670 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.45□□□□□ -1.54
RFX1P22670 AL161670.1-201ENST00000554348 137 ntBASIC5.45□□□□□ -1.54
RFX1P22670 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX1P22670 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX1P22670 PRR13P7-201ENST00000605538 430 ntBASIC5.45□□□□□ -1.54
RFX1P22670 AL713922.2-201ENST00000619384 716 ntBASIC5.45□□□□□ -1.54
RFX1P22670 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX1P22670 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RFX1P22670 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX1P22670 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms