Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC007327.1-201ENST00000447461 264 ntBASIC2.21□□□□□ -2.06
USF1P22415 RPS20P22-201ENST00000473700 357 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC126182.1-201ENST00000478134 357 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC104982.1-201ENST00000478775 574 ntBASIC2.21□□□□□ -2.06
USF1P22415 RPL23AP70-201ENST00000483361 460 ntBASIC2.21□□□□□ -2.06
USF1P22415 TBCAP3-201ENST00000512475 312 ntBASIC2.21□□□□□ -2.06
USF1P22415 RNA5SP24-201ENST00000516478 95 ntBASIC2.21□□□□□ -2.06
USF1P22415 NRON-201ENST00000517270 370 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC091163.3-201ENST00000518269 1144 ntBASIC2.21□□□□□ -2.06
USF1P22415 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
USF1P22415 RPL7P20-201ENST00000520308 745 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.21□□□□□ -2.06
USF1P22415 GLYCAM1-201ENST00000546596 285 ntBASIC2.21□□□□□ -2.06
USF1P22415 AL391261.3-201ENST00000557194 520 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC005951.2-201ENST00000576282 495 ntBASIC2.21□□□□□ -2.06
USF1P22415 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.21□□□□□ -2.06
USF1P22415 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.21□□□□□ -2.06
USF1P22415 AC005046.1-201ENST00000608515 625 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC092574.1-201ENST00000609771 420 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
USF1P22415 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
USF1P22415 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.21□□□□□ -2.06
USF1P22415 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
USF1P22415 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USF1P22415 AC011477.1-204ENST00000623416 1325 ntBASIC2.2□□□□□ -2.06
USF1P22415 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USF1P22415 SNORD62.1-201ENST00000362541 86 ntBASIC2.2□□□□□ -2.06
USF1P22415 RNU6-621P-201ENST00000364752 109 ntBASIC2.2□□□□□ -2.06
USF1P22415 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USF1P22415 RPL23AP29-201ENST00000397284 453 ntBASIC2.2□□□□□ -2.06
USF1P22415 RPS4XP7-201ENST00000406274 780 ntBASIC2.2□□□□□ -2.06
USF1P22415 RNU2-33P-201ENST00000410344 192 ntBASIC2.2□□□□□ -2.06
USF1P22415 RNU6-516P-201ENST00000411381 104 ntBASIC2.2□□□□□ -2.06
USF1P22415 AL953862.1-201ENST00000423016 168 ntBASIC2.2□□□□□ -2.06
USF1P22415 ZNF863P-201ENST00000426746 417 ntBASIC2.2□□□□□ -2.06
USF1P22415 GTF2IP20-201ENST00000431663 360 ntBASIC2.2□□□□□ -2.06
USF1P22415 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.2□□□□□ -2.06
USF1P22415 AC112220.1-201ENST00000434628 355 ntBASIC2.2□□□□□ -2.06
USF1P22415 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.2□□□□□ -2.06
USF1P22415 AL121890.1-201ENST00000435457 205 ntBASIC2.2□□□□□ -2.06
USF1P22415 RPS15AP7-201ENST00000439294 405 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.2□□□□□ -2.06
USF1P22415 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
USF1P22415 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.2□□□□□ -2.06
USF1P22415 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.2□□□□□ -2.06
USF1P22415 AC090525.1-201ENST00000479116 478 ntBASIC2.2□□□□□ -2.06
USF1P22415 YWHAEP4-201ENST00000505390 198 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC096571.1-202ENST00000506634 735 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC022447.3-201ENST00000506865 495 ntBASIC2.2□□□□□ -2.06
USF1P22415 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.2□□□□□ -2.06
USF1P22415 AC021451.1-201ENST00000523498 1129 ntBASIC2.2□□□□□ -2.06
USF1P22415 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USF1P22415 UBTFL10-201ENST00000528532 562 ntBASIC2.2□□□□□ -2.06
USF1P22415 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
USF1P22415 AL133271.1-201ENST00000538229 291 ntBASIC2.2□□□□□ -2.06
USF1P22415 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.2□□□□□ -2.06
USF1P22415 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.2□□□□□ -2.06
USF1P22415 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USF1P22415 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.2□□□□□ -2.06
USF1P22415 AC087465.1-201ENST00000560574 245 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC025281.1-201ENST00000567026 265 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.2□□□□□ -2.06
USF1P22415 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.2□□□□□ -2.06
USF1P22415 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
USF1P22415 AL355877.2-201ENST00000603670 358 ntBASIC2.2□□□□□ -2.06
USF1P22415 AL359757.2-201ENST00000624309 274 ntBASIC2.2□□□□□ -2.06
USF1P22415 AC019226.1-201ENST00000625666 515 ntBASIC2.2□□□□□ -2.06
USF1P22415 CTSLP2-204ENST00000629029 392 ntBASIC2.2□□□□□ -2.06
USF1P22415 MTND1P37-201ENST00000636562 264 ntBASIC2.2□□□□□ -2.06
USF1P22415 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.2□□□□□ -2.06
USF1P22415 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
USF1P22415 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
USF1P22415 AC092447.10-201ENST00000620607 1652 ntBASIC2.2□□□□□ -2.06
USF1P22415 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.2□□□□□ -2.06
USF1P22415 DDX43P2-201ENST00000604753 1354 ntBASIC2.2□□□□□ -2.06
USF1P22415 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
USF1P22415 AC135776.4-201ENST00000624300 1904 ntBASIC2.19□□□□□ -2.06
USF1P22415 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
USF1P22415 AC093536.2-201ENST00000565257 1406 ntBASIC2.19□□□□□ -2.06
USF1P22415 SNORA68.1-201ENST00000364537 132 ntBASIC2.19□□□□□ -2.06
USF1P22415 Y_RNA.311-201ENST00000365068 96 ntBASIC2.19□□□□□ -2.06
USF1P22415 RNU6-114P-201ENST00000384704 105 ntBASIC2.19□□□□□ -2.06
USF1P22415 AL590084.2-201ENST00000401481 382 ntBASIC2.19□□□□□ -2.06
USF1P22415 AL513475.1-201ENST00000406602 315 ntBASIC2.19□□□□□ -2.06
USF1P22415 MIR1284-201ENST00000408337 120 ntBASIC2.19□□□□□ -2.06
USF1P22415 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USF1P22415 RN7SKP140-201ENST00000411196 284 ntBASIC2.19□□□□□ -2.06
USF1P22415 NPM1P11-201ENST00000417106 855 ntBASIC2.19□□□□□ -2.06
USF1P22415 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.19□□□□□ -2.06
USF1P22415 AC007919.1-201ENST00000429380 217 ntBASIC2.19□□□□□ -2.06
USF1P22415 SNRPEP7-201ENST00000438350 220 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USF1P22415 ZNF886P-201ENST00000450781 723 ntBASIC2.19□□□□□ -2.06
USF1P22415 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.19□□□□□ -2.06
USF1P22415 MTND1P16-201ENST00000465177 898 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms