Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RN7SKP177-201ENST00000410567 355 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RNU2-47P-201ENST00000410649 186 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RHEBP3-201ENST00000411920 351 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AF228730.4-201ENST00000421457 183 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AL138785.1-201ENST00000425821 331 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 MTND4P19-201ENST00000446659 478 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC233279.1-201ENST00000455300 423 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 HMGB1P25-201ENST00000468402 607 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC004062.1-201ENST00000509926 645 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RNU4-49P-201ENST00000516080 140 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RNU6-277P-201ENST00000516272 106 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 Y_RNA.691-201ENST00000516611 103 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 SCARNA14-201ENST00000516903 136 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RN7SKP256-201ENST00000517201 314 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 RAB9BP1-201ENST00000519581 626 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 MIR4644-201ENST00000579929 84 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC112484.5-201ENST00000624189 228 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 MIR7641-1-201ENST00000627518 61 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 MTND5P42-201ENST00000637720 498 ntBASIC3.45□□□□□ -1.86
TNFRSF1BP20333 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TNFRSF1BP20333 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 TAB3P1-202ENST00000452645 1634 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 MTND4P14-201ENST00000435799 1354 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 FRG1CP-201ENST00000358464 769 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 Y_RNA.162-201ENST00000363683 102 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 Y_RNA.326-201ENST00000365176 113 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 U1.1-201ENST00000384101 164 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 SNORA70E-201ENST00000384492 135 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNA5SP317-201ENST00000410176 116 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU2-36P-201ENST00000410361 191 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU6-1148P-201ENST00000410992 104 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNA5SP311-201ENST00000411290 116 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL354751.2-201ENST00000415471 210 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 BTF3L4P3-201ENST00000418879 476 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL590639.1-201ENST00000456484 337 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU6-329P-201ENST00000459618 107 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC006463.2-201ENST00000473326 348 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC112206.3-201ENST00000514578 389 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNA5SP315-201ENST00000516340 116 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNU6-1092P-201ENST00000516955 87 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RNA5SP312-201ENST00000517068 116 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC100870.1-201ENST00000522035 505 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 DEFB108D-201ENST00000527787 222 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC103843.2-201ENST00000530523 682 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 MIR4284-201ENST00000578924 81 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 MIR4293-201ENST00000584305 78 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC110741.2-201ENST00000605278 268 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC021646.1-201ENST00000605469 484 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
TNFRSF1BP20333 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF1BP20333 EXOC5P1-201ENST00000510543 1969 ntBASIC3.43□□□□□ -1.86
TNFRSF1BP20333 MTCO1P24-201ENST00000515438 1558 ntBASIC3.43□□□□□ -1.86
TNFRSF1BP20333 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF1BP20333 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF1BP20333 MIR372-201ENST00000362225 67 ntBASIC3.43□□□□□ -1.86
TNFRSF1BP20333 Y_RNA.67-201ENST00000362870 100 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms