Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.64□□□□□ -1.99
SDC1P18827 AC091489.2-201ENST00000566263 604 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AC145350.1-201ENST00000567426 208 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AF038458.1-201ENST00000588406 262 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.64□□□□□ -1.99
SDC1P18827 AC068790.3-201ENST00000602988 553 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AC013476.2-201ENST00000614456 459 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AC010133.1-201ENST00000615809 842 ntBASIC2.64□□□□□ -1.99
SDC1P18827 MIR7844-201ENST00000616161 122 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC1P18827 AP003485.2-201ENST00000623636 610 ntBASIC2.64□□□□□ -1.99
SDC1P18827 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
SDC1P18827 AC079416.3-201ENST00000624479 549 ntBASIC2.64□□□□□ -1.99
SDC1P18827 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
SDC1P18827 AC006927.3-201ENST00000638789 384 ntBASIC2.64□□□□□ -1.99
SDC1P18827 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDC1P18827 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SDC1P18827 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC1P18827 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC1P18827 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC1P18827 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC1P18827 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC1P18827 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC1P18827 RNU5F-6P-201ENST00000362979 116 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RNU6-553P-201ENST00000364047 96 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RNU6-501P-201ENST00000364072 100 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RNU6-809P-201ENST00000384461 107 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RPS20P2-201ENST00000402520 389 ntBASIC2.63□□□□□ -1.99
SDC1P18827 TXNP7-201ENST00000406296 293 ntBASIC2.63□□□□□ -1.99
SDC1P18827 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.63□□□□□ -1.99
SDC1P18827 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC1P18827 MTND4P20-201ENST00000424125 869 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RPS20P5-201ENST00000434808 360 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RPL39P40-201ENST00000445481 146 ntBASIC2.63□□□□□ -1.99
SDC1P18827 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC1P18827 RNU7-59P-201ENST00000459101 61 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RPS20P20-201ENST00000460498 340 ntBASIC2.63□□□□□ -1.99
SDC1P18827 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 BZW1P2-201ENST00000473537 826 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RPL30P6-201ENST00000475925 342 ntBASIC2.63□□□□□ -1.99
SDC1P18827 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC1P18827 SNORA74D-201ENST00000516404 141 ntBASIC2.63□□□□□ -1.99
SDC1P18827 RNU6-1003P-201ENST00000517099 105 ntBASIC2.63□□□□□ -1.99
SDC1P18827 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC1P18827 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 PCMTD1P2-201ENST00000565017 355 ntBASIC2.63□□□□□ -1.99
SDC1P18827 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.63□□□□□ -1.99
SDC1P18827 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 AL627309.6-201ENST00000606857 840 ntBASIC2.63□□□□□ -1.99
SDC1P18827 MIR92B-201ENST00000607575 96 ntBASIC2.63□□□□□ -1.99
SDC1P18827 AL391813.2-201ENST00000609113 322 ntBASIC2.63□□□□□ -1.99
SDC1P18827 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDC1P18827 SDR42E1P2-201ENST00000614861 481 ntBASIC2.63□□□□□ -1.99
SDC1P18827 AC097655.1-201ENST00000635075 318 ntBASIC2.63□□□□□ -1.99
SDC1P18827 OR5H6-203ENST00000642105 978 ntBASIC2.63□□□□□ -1.99
SDC1P18827 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SDC1P18827 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
SDC1P18827 AL445523.1-201ENST00000451184 1362 ntBASIC2.62□□□□□ -1.99
SDC1P18827 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC1P18827 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDC1P18827 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
SDC1P18827 PABPC1P9-201ENST00000426076 1612 ntBASIC2.62□□□□□ -1.99
SDC1P18827 RNY4P24-201ENST00000362735 96 ntBASIC2.62□□□□□ -1.99
SDC1P18827 SNORA14A-201ENST00000364773 135 ntBASIC2.62□□□□□ -1.99
SDC1P18827 Y_RNA.560-201ENST00000384689 102 ntBASIC2.62□□□□□ -1.99
SDC1P18827 RN7SKP140-201ENST00000411196 284 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC1P18827 EEF1A1P41-201ENST00000414667 207 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AC107081.1-201ENST00000414975 361 ntBASIC2.62□□□□□ -1.99
SDC1P18827 Z85995.1-201ENST00000415547 335 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL451054.2-201ENST00000420896 202 ntBASIC2.62□□□□□ -1.99
SDC1P18827 USP9YP26-201ENST00000421008 661 ntBASIC2.62□□□□□ -1.99
SDC1P18827 RPL35AP12-201ENST00000425362 338 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AC092447.3-201ENST00000426027 686 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL590383.1-201ENST00000428602 75 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC1P18827 AL512286.1-201ENST00000439244 400 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AC005094.1-201ENST00000440420 368 ntBASIC2.62□□□□□ -1.99
SDC1P18827 ELOCP30-201ENST00000447108 299 ntBASIC2.62□□□□□ -1.99
SDC1P18827 EPS15P1-201ENST00000448836 336 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC1P18827 SNRPGP6-201ENST00000451124 220 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC1P18827 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.62□□□□□ -1.99
SDC1P18827 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC1P18827 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC1P18827 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.62□□□□□ -1.99
SDC1P18827 MTND1P22-201ENST00000510572 951 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.62□□□□□ -1.99
SDC1P18827 RN7SKP57-201ENST00000517248 293 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AP000867.2-201ENST00000532468 320 ntBASIC2.62□□□□□ -1.99
SDC1P18827 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.62□□□□□ -1.99
SDC1P18827 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.62□□□□□ -1.99
SDC1P18827 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.62□□□□□ -1.99
SDC1P18827 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
SDC1P18827 ACTR3BP3-201ENST00000565577 979 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms