Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SNORD116-5-201ENST00000384462 95 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 MIR128-1-201ENST00000384921 82 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 MIR325-201ENST00000385260 98 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP293-201ENST00000410527 113 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC245291.1-201ENST00000419501 328 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 USP9YP36-201ENST00000424581 829 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC016696.1-201ENST00000446949 318 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC020550.1-201ENST00000447385 163 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 snoU109.1-201ENST00000459339 135 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC006445.2-201ENST00000510061 472 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 Y_RNA.672-201ENST00000516289 104 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AP002453.2-201ENST00000533503 320 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 OR5H6-203ENST00000642105 978 ntBASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RAB40ALP0C0E4 AC021755.1-201ENST00000559747 1447 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 FAM35BP-202ENST00000497389 3337 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL079305.1-201ENST00000623159 3008 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 GNG5P1-201ENST00000255500 204 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP374-201ENST00000362939 125 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RPS3AP3-201ENST00000411933 242 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL589872.1-201ENST00000426602 288 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL512844.2-201ENST00000433990 593 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 MTATP6P30-201ENST00000443540 664 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AP000936.2-201ENST00000447151 681 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL033528.1-201ENST00000453780 140 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 HMGN2P13-201ENST00000476476 274 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 MTND1P3-201ENST00000484956 952 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC010587.1-201ENST00000505809 469 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 RNA5SP291-201ENST00000517222 105 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL163153.1-201ENST00000554223 283 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 PIGPP4-201ENST00000584447 307 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AL162713.1-201ENST00000604480 262 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 AC007785.2-201ENST00000598627 1916 ntBASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40ALP0C0E4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 PGBD4P3-201ENST00000440731 581 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 MTND6P13-201ENST00000443510 523 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 ST13P20-201ENST00000447996 1065 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 RPS20P22-201ENST00000473700 357 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 RNU6-711P-201ENST00000517255 106 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
RAB40ALP0C0E4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms