Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC091144.1-201ENST00000519573 138 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFAP04085 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFAP04085 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFAP04085 AL049839.1-201ENST00000556151 657 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 AMZ2P1-203ENST00000565833 850 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFAP04085 AL109918.3-201ENST00000603072 338 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 AL161629.2-201ENST00000615347 275 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFAP04085 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
PDGFAP04085 Z73965.1-201ENST00000623412 2297 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFAP04085 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
PDGFAP04085 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFAP04085 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFAP04085 AC104964.3-201ENST00000606115 2860 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFAP04085 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFAP04085 Y_RNA.14-201ENST00000362415 103 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 Y_RNA.64-201ENST00000362845 102 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 Y_RNA.471-201ENST00000384312 102 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 MIR105-1-201ENST00000385222 81 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFAP04085 HSPA8P15-201ENST00000401676 786 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AL603908.1-201ENST00000406098 201 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 RNF10P1-201ENST00000418589 369 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AL117339.3-201ENST00000418733 162 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 AL590383.1-201ENST00000428602 75 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.89□□□□□ -1.63
PDGFAP04085 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFAP04085 snoU13.24-201ENST00000458998 104 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 RPL39P38-201ENST00000467018 153 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 RPL30P10-201ENST00000488148 337 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AC008897.1-201ENST00000494006 347 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AK3P2-201ENST00000507976 429 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 RNU6-1023P-201ENST00000516137 106 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 RNU6-897P-201ENST00000517135 105 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AC025755.1-201ENST00000521306 278 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFAP04085 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFAP04085 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.89□□□□□ -1.63
PDGFAP04085 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFAP04085 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFAP04085 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFAP04085 MIR3128-201ENST00000581957 66 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFAP04085 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFAP04085 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFAP04085 DDX18P3-201ENST00000404856 2007 ntBASIC4.89□□□□□ -1.63
PDGFAP04085 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFAP04085 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFAP04085 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFAP04085 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDGFAP04085 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFAP04085 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 RN7SKP227-201ENST00000364445 330 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 SNORA20.1-201ENST00000364790 130 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 RNU6-741P-201ENST00000383889 107 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 RNU1-136P-201ENST00000384181 164 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 Y_RNA.515-201ENST00000384535 112 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 Y_RNA.592-201ENST00000410274 109 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 RNU2-33P-201ENST00000410344 192 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 RNU2-38P-201ENST00000410856 79 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 RPL27AP8-201ENST00000424277 446 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.88□□□□□ -1.63
PDGFAP04085 AC007919.1-201ENST00000429380 217 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFAP04085 RPS24P6-201ENST00000452670 400 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 RN7SL459P-201ENST00000481078 302 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 HMGB1P22-201ENST00000505315 124 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 Y_RNA.680-201ENST00000516441 93 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC109329.1-201ENST00000518744 317 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFAP04085 AC034114.1-201ENST00000520293 285 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC027369.5-201ENST00000533838 755 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC004024.1-201ENST00000549244 247 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC103996.1-201ENST00000555468 102 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 AC010632.3-201ENST00000611377 369 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 AC091905.4-201ENST00000623432 202 ntBASIC4.88□□□□□ -1.63
PDGFAP04085 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PDGFAP04085 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDGFAP04085 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFAP04085 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms