Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.05□□□□□ -2.08
APOEP02649 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOEP02649 YWHAEP4-201ENST00000505390 198 ntBASIC2.05□□□□□ -2.08
APOEP02649 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 RNA5SP135-201ENST00000517019 125 ntBASIC2.05□□□□□ -2.08
APOEP02649 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
APOEP02649 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 AP002748.2-201ENST00000528671 348 ntBASIC2.05□□□□□ -2.08
APOEP02649 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 AP000873.5-201ENST00000533906 236 ntBASIC2.05□□□□□ -2.08
APOEP02649 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 AL391261.3-201ENST00000557194 520 ntBASIC2.05□□□□□ -2.08
APOEP02649 AC087465.1-201ENST00000560574 245 ntBASIC2.05□□□□□ -2.08
APOEP02649 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 MIR3616-201ENST00000584070 92 ntBASIC2.05□□□□□ -2.08
APOEP02649 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.16-201ENST00000613119 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.12-201ENST00000613778 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.9-201ENST00000615427 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.11-201ENST00000616345 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.2-201ENST00000616535 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.3-201ENST00000617785 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.19-201ENST00000618602 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 RNU2-1-201ENST00000618664 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.6-201ENST00000619225 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.5-201ENST00000619465 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 U2.10-201ENST00000620268 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 AL354685.2-201ENST00000448218 1447 ntBASIC2.05□□□□□ -2.08
APOEP02649 OR4G2P-202ENST00000641004 1759 ntBASIC2.05□□□□□ -2.08
APOEP02649 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
APOEP02649 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOEP02649 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
APOEP02649 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
APOEP02649 AC007560.1-201ENST00000426912 237 ntBASIC2.04□□□□□ -2.08
APOEP02649 AL590383.1-201ENST00000428602 75 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC234064.1-201ENST00000436312 247 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC241584.1-201ENST00000438469 1241 ntBASIC2.04□□□□□ -2.08
APOEP02649 MTND3P4-201ENST00000453537 303 ntBASIC2.04□□□□□ -2.08
APOEP02649 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.04□□□□□ -2.08
APOEP02649 snoU13.26-201ENST00000459452 105 ntBASIC2.04□□□□□ -2.08
APOEP02649 RPL32P14-201ENST00000463196 378 ntBASIC2.04□□□□□ -2.08
APOEP02649 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.04□□□□□ -2.08
APOEP02649 RN7SKP31-201ENST00000516354 278 ntBASIC2.04□□□□□ -2.08
APOEP02649 RNU2-44P-201ENST00000516795 194 ntBASIC2.04□□□□□ -2.08
APOEP02649 SNORA31.22-201ENST00000517204 135 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.04□□□□□ -2.08
APOEP02649 AC022634.1-201ENST00000520765 532 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.04□□□□□ -2.08
APOEP02649 AP003066.2-201ENST00000529375 555 ntBASIC2.04□□□□□ -2.08
APOEP02649 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.04□□□□□ -2.08
APOEP02649 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.04□□□□□ -2.08
APOEP02649 RN7SL622P-201ENST00000585292 275 ntBASIC2.04□□□□□ -2.08
APOEP02649 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC136601.2-201ENST00000604356 474 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC135507.1-201ENST00000607214 561 ntBASIC2.04□□□□□ -2.08
APOEP02649 DUXAP10-204ENST00000612052 616 ntBASIC2.04□□□□□ -2.08
APOEP02649 SDR42E1P2-201ENST00000614861 481 ntBASIC2.04□□□□□ -2.08
APOEP02649 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
APOEP02649 AC007785.2-201ENST00000598627 1916 ntBASIC2.03□□□□□ -2.08
APOEP02649 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOEP02649 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
APOEP02649 MIR514A1-201ENST00000385133 98 ntBASIC2.03□□□□□ -2.08
APOEP02649 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOEP02649 RNU6-920P-201ENST00000410926 92 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.03□□□□□ -2.08
APOEP02649 AC008173.1-201ENST00000418901 264 ntBASIC2.03□□□□□ -2.08
APOEP02649 ZNF90P2-204ENST00000419323 1075 ntBASIC2.03□□□□□ -2.08
APOEP02649 SEPT2P1-201ENST00000419651 180 ntBASIC2.03□□□□□ -2.08
APOEP02649 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 AL356867.1-201ENST00000429623 299 ntBASIC2.03□□□□□ -2.08
APOEP02649 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 ARF4P4-201ENST00000439608 520 ntBASIC2.03□□□□□ -2.08
APOEP02649 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 AC002542.1-201ENST00000440683 193 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL691517.1-201ENST00000440833 1235 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL049734.2-201ENST00000441066 616 ntBASIC2.03□□□□□ -2.08
APOEP02649 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 snoU13.15-201ENST00000459407 104 ntBASIC2.03□□□□□ -2.08
APOEP02649 AC138853.1-201ENST00000503549 823 ntBASIC2.03□□□□□ -2.08
APOEP02649 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 AC118282.2-201ENST00000508739 374 ntBASIC2.03□□□□□ -2.08
APOEP02649 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.03□□□□□ -2.08
APOEP02649 AC022483.1-201ENST00000514020 567 ntBASIC2.03□□□□□ -2.08
APOEP02649 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.03□□□□□ -2.08
APOEP02649 AP000916.1-201ENST00000533869 835 ntBASIC2.03□□□□□ -2.08
APOEP02649 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.03□□□□□ -2.08
APOEP02649 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.03□□□□□ -2.08
APOEP02649 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
APOEP02649 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL022067.1-201ENST00000602426 454 ntBASIC2.03□□□□□ -2.08
APOEP02649 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
APOEP02649 AP001521.1-201ENST00000609150 300 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms