Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC018754.1-201ENST00000607486 925 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 AC121761.2-201ENST00000617300 689 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 AL031601.2-202ENST00000622650 282 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SPTA1P02549 AC008669.1-201ENST00000565823 2178 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTA1P02549 AC093801.2-201ENST00000503966 1050 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 OR5H4P-201ENST00000510851 923 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTA1P02549 AL121839.1-201ENST00000556233 1185 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 MIR4474-201ENST00000579189 78 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 MIR4723-201ENST00000585070 81 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.02□□□□□ -2.25
SPTA1P02549 AC087588.2-201ENST00000617667 426 ntBASIC1.02□□□□□ -2.25
SPTA1P02549 MIR330-201ENST00000362196 94 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 RNU6-670P-201ENST00000364312 104 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 MIR1197-201ENST00000408818 88 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTA1P02549 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTA1P02549 AC245128.3-201ENST00000594721 748 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC022079.2-201ENST00000619739 566 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTA1P02549 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTA1P02549 RPL31P52-201ENST00000407532 367 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTA1P02549 UBBP3-201ENST00000445497 241 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC092902.1-201ENST00000486999 259 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.01□□□□□ -2.25
SPTA1P02549 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTA1P02549 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTA1P02549 VN1R84P-201ENST00000593697 235 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 LLPHP1-201ENST00000603571 367 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 uc_338.20-201ENST00000621563 178 ntBASIC1.01□□□□□ -2.25
SPTA1P02549 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1□□□□□ -2.25
SPTA1P02549 SNORA6-201ENST00000384033 151 ntBASIC1□□□□□ -2.25
SPTA1P02549 NAP1L4P3-201ENST00000432820 1147 ntBASIC1□□□□□ -2.25
SPTA1P02549 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
SPTA1P02549 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 AL121871.1-201ENST00000443413 436 ntBASIC1□□□□□ -2.25
SPTA1P02549 PSPHP1-201ENST00000450062 261 ntBASIC1□□□□□ -2.25
SPTA1P02549 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1□□□□□ -2.25
SPTA1P02549 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1□□□□□ -2.25
SPTA1P02549 RNU4-60P-201ENST00000517239 135 ntBASIC1□□□□□ -2.25
SPTA1P02549 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1□□□□□ -2.25
SPTA1P02549 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 MIR4512-201ENST00000583257 77 ntBASIC1□□□□□ -2.25
SPTA1P02549 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SPTA1P02549 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1□□□□□ -2.25
SPTA1P02549 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1□□□□□ -2.25
SPTA1P02549 AL136520.1-201ENST00000600311 1322 ntBASIC1□□□□□ -2.25
SPTA1P02549 MTND4P34-201ENST00000572715 1371 ntBASIC1□□□□□ -2.25
SPTA1P02549 RNU6-203P-201ENST00000384038 104 ntBASIC1□□□□□ -2.25
SPTA1P02549 RNU6-17P-201ENST00000384245 107 ntBASIC1□□□□□ -2.25
SPTA1P02549 RNU6-18P-201ENST00000384527 107 ntBASIC1□□□□□ -2.25
SPTA1P02549 MIR92A2-201ENST00000385299 75 ntBASIC1□□□□□ -2.25
SPTA1P02549 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 SMARCE1P4-201ENST00000523647 241 ntBASIC1□□□□□ -2.25
SPTA1P02549 VN1R107P-201ENST00000601784 209 ntBASIC1□□□□□ -2.25
SPTA1P02549 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1□□□□□ -2.25
SPTA1P02549 AC073055.1-201ENST00000456901 1621 ntBASIC1□□□□□ -2.25
SPTA1P02549 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SPTA1P02549 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 CR848007.2-201ENST00000424918 787 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 DPPA3P1-201ENST00000448050 469 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SPTA1P02549 RPL7P18-201ENST00000478965 734 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 MRPL42P6-201ENST00000486397 371 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.99□□□□□ -2.25
SPTA1P02549 OR4R1P-201ENST00000529879 463 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
SPTA1P02549 AL163153.1-201ENST00000554223 283 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.99□□□□□ -2.25
SPTA1P02549 AC113368.1-201ENST00000603736 382 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.99□□□□□ -2.25
SPTA1P02549 HNRNPDP2-201ENST00000406475 478 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 RPL30P4-201ENST00000429309 333 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.99□□□□□ -2.25
SPTA1P02549 AL512661.1-201ENST00000434586 1253 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 CLIC4P1-201ENST00000453177 535 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.99□□□□□ -2.25
SPTA1P02549 RNU6-943P-201ENST00000516960 98 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.99□□□□□ -2.25
SPTA1P02549 AC090897.2-201ENST00000581715 130 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 SNRPGP15-201ENST00000600149 222 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.99□□□□□ -2.25
SPTA1P02549 AL137003.2-201ENST00000606924 2538 ntBASIC0.99□□□□□ -2.25
SPTA1P02549 AC138915.1-201ENST00000565427 1685 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.98□□□□□ -2.25
SPTA1P02549 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.98□□□□□ -2.25
SPTA1P02549 SNORD121B-201ENST00000458838 81 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC103833.1-201ENST00000517442 172 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 MTCO1P47-201ENST00000523889 1271 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC146944.4-201ENST00000602697 718 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms