Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC236972.2-201ENST00000434979 310 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 SEPT14P3-201ENST00000439401 183 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RPL23AP16-201ENST00000441715 421 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AL732372.2-207ENST00000445840 183 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 RPL7P59-201ENST00000447700 943 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.05□□□□□ -1.76
COL3A1P02461 SEPT14P2-201ENST00000453405 183 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 MTND1P12-201ENST00000455231 147 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC106872.3-201ENST00000495104 446 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC093809.1-201ENST00000509155 340 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 SEPT14P4-201ENST00000513445 186 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RFPL4AP3-201ENST00000515267 345 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 FO082796.1-201ENST00000523795 183 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC007151.1-201ENST00000572774 483 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC007621.1-201ENST00000604544 437 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC004853.1-201ENST00000604902 698 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AL133255.1-201ENST00000606374 441 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC068722.2-201ENST00000618734 544 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL3A1P02461 AC006378.2-201ENST00000623178 2476 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COL3A1P02461 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 OR1S2-201ENST00000302592 978 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 SNORD115.1-201ENST00000391109 76 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AL354719.1-201ENST00000406535 843 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RNA5SP293-201ENST00000410527 113 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RN7SKP140-201ENST00000411196 284 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AL359704.1-201ENST00000411586 781 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 NCOR1P3-201ENST00000420479 303 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 AL445669.1-201ENST00000426743 755 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 OR2AS1P-201ENST00000427827 319 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RPL12P46-201ENST00000436610 195 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 BRK1P2-201ENST00000442875 223 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 RPL7P12-201ENST00000446719 750 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC006390.1-201ENST00000508068 283 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.05□□□□□ -1.76
COL3A1P02461 RNU6-445P-201ENST00000516949 107 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC105029.1-201ENST00000520250 669 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 AP001180.3-201ENST00000582221 145 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 MIR544B-201ENST00000582372 78 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC090312.2-201ENST00000582687 378 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.05□□□□□ -1.76
COL3A1P02461 AC105429.2-201ENST00000610567 517 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AL162274.2-201ENST00000614406 332 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AP006248.2-201ENST00000623309 592 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 AC134503.1-201ENST00000633048 54 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 MIR1302-1-201ENST00000637932 143 ntBASIC4.05□□□□□ -1.76
COL3A1P02461 CKAP2P1-201ENST00000555477 2049 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL3A1P02461 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.04□□□□□ -1.76
COL3A1P02461 FAM35BP-202ENST00000497389 3337 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL3A1P02461 RNU4-7P-201ENST00000364758 141 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 MIR320C1-201ENST00000408566 88 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 RNU2-8P-201ENST00000410727 190 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 OR9R1P-201ENST00000412200 877 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 AC133104.1-201ENST00000429100 218 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 CBWD4P-201ENST00000445695 655 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 RNU6-420P-201ENST00000458780 107 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 MEMO1P3-201ENST00000459811 302 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 ST13P14-201ENST00000474095 734 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.04□□□□□ -1.76
COL3A1P02461 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.04□□□□□ -1.76
COL3A1P02461 AC093012.1-202ENST00000549403 582 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 AC020661.2-201ENST00000560114 134 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.04□□□□□ -1.76
COL3A1P02461 AC093519.1-201ENST00000566109 298 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.04□□□□□ -1.76
COL3A1P02461 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.04□□□□□ -1.76
COL3A1P02461 TPMTP1-201ENST00000592307 737 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.04□□□□□ -1.76
COL3A1P02461 RMST_7.1-201ENST00000621935 268 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 AC026634.1-201ENST00000634369 198 ntBASIC4.04□□□□□ -1.76
COL3A1P02461 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.04□□□□□ -1.76
COL3A1P02461 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL3A1P02461 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL3A1P02461 MTND5P23-201ENST00000430812 1655 ntBASIC4.03□□□□□ -1.76
COL3A1P02461 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
COL3A1P02461 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL3A1P02461 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL3A1P02461 GNG5P1-201ENST00000255500 204 ntBASIC4.03□□□□□ -1.76
COL3A1P02461 OR52B1P-201ENST00000316506 909 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms