Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 IGJP1-201ENST00000522682 475 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.16□□□□□ -1.9
COL2A1P02458 ZNF519P2-201ENST00000557032 169 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.16□□□□□ -1.9
COL2A1P02458 PCMTD1P2-201ENST00000565017 355 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC012150.2-201ENST00000621300 544 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC009033.1-201ENST00000624279 431 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 AC068880.5-201ENST00000624331 290 ntBASIC3.16□□□□□ -1.9
COL2A1P02458 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
COL2A1P02458 HSPA8P4-201ENST00000511877 1920 ntBASIC3.15□□□□□ -1.9
COL2A1P02458 MTND4P23-201ENST00000447723 1363 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL2A1P02458 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL2A1P02458 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
COL2A1P02458 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL2A1P02458 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL2A1P02458 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL2A1P02458 Y_RNA.450-201ENST00000384198 113 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 RNU6-532P-201ENST00000384318 107 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 CALM2P3-201ENST00000400429 449 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.15□□□□□ -1.91
COL2A1P02458 MTCO1P48-201ENST00000448024 1096 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 VPS26AP1-201ENST00000483197 979 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC108210.2-201ENST00000503681 201 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 SCARNA15.1-201ENST00000516384 125 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.15□□□□□ -1.91
COL2A1P02458 AK6P1-201ENST00000540219 478 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 PDCD5P1-201ENST00000543528 309 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.15□□□□□ -1.91
COL2A1P02458 AL117336.2-201ENST00000602435 335 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC078795.3-201ENST00000602913 472 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC090578.1-201ENST00000604955 591 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC007038.2-201ENST00000608095 740 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AL020991.1-201ENST00000612314 373 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC008250.2-201ENST00000615261 205 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC002553.4-201ENST00000616896 331 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 STMN1P1-201ENST00000617809 440 ntBASIC3.15□□□□□ -1.91
COL2A1P02458 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
COL2A1P02458 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 MTND5P23-201ENST00000430812 1655 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 ZNF680P1-201ENST00000436625 1469 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 RNU5F-6P-201ENST00000362979 116 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 Y_RNA.356-201ENST00000365475 113 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 RNU6-98P-201ENST00000384173 107 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 RNU6-195P-201ENST00000411352 109 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 AIMP1P1-201ENST00000418670 937 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 AL356583.2-201ENST00000426536 280 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 AL358934.1-201ENST00000432346 324 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 UBE2V1P5-201ENST00000440070 405 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AP000797.1-201ENST00000478870 387 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 GAPDHP39-201ENST00000481866 979 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC105252.1-201ENST00000503089 286 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 MTCYBP17-201ENST00000503579 789 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
COL2A1P02458 AC009646.1-201ENST00000510455 318 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 SNORA20.3-201ENST00000516880 132 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
COL2A1P02458 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.14□□□□□ -1.91
COL2A1P02458 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 HMGB3P26-201ENST00000560051 582 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC138915.2-201ENST00000569776 97 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AP001429.1-201ENST00000602568 530 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 AC025754.2-201ENST00000606491 432 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
COL2A1P02458 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.14□□□□□ -1.91
COL2A1P02458 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL2A1P02458 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL2A1P02458 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL2A1P02458 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL2A1P02458 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL2A1P02458 RNU6-181P-201ENST00000363225 107 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 RNU4-91P-201ENST00000364778 135 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 MIR181A1-201ENST00000385026 110 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 RNU6-1300P-201ENST00000391046 108 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 RNA5SP105-201ENST00000391123 113 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 MIR1284-201ENST00000408337 120 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 RPL23AP39-201ENST00000415533 405 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms