Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SNORA46.1-201ENST00000391069 153 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC092745.2-202ENST00000411880 369 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 HMGN2P16-201ENST00000456802 261 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.6□□□□□ -2.15
POLR1AO95602 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 RPS15AP11-201ENST00000594193 385 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AL133507.1-201ENST00000605269 557 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC243773.3-201ENST00000613270 256 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC111188.2-201ENST00000529697 1387 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
POLR1AO95602 RNU4-72P-201ENST00000410754 173 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 MTCO3P46-201ENST00000425787 232 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 OR9N1P-202ENST00000494289 481 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 CDC42P4-201ENST00000510507 563 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.6□□□□□ -2.15
POLR1AO95602 AC007275.1-201ENST00000621243 671 ntBASIC1.6□□□□□ -2.15
POLR1AO95602 ZNF33CP-201ENST00000432492 2030 ntBASIC1.59□□□□□ -2.15
POLR1AO95602 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.16
POLR1AO95602 AL353898.1-201ENST00000444055 238 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 RNA5SP233-201ENST00000459153 113 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.59□□□□□ -2.16
POLR1AO95602 OR5H4P-201ENST00000510851 923 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 CYP3A137P-201ENST00000562436 69 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 AL161912.3-201ENST00000605404 628 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 AL050343.2-201ENST00000607338 280 ntBASIC1.59□□□□□ -2.16
POLR1AO95602 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
POLR1AO95602 MIR607-201ENST00000385241 96 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 AL596276.1-201ENST00000434465 418 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 AL139109.1-201ENST00000455491 297 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 AC010627.1-201ENST00000503819 1294 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 AC025918.2-201ENST00000558683 763 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.58□□□□□ -2.16
POLR1AO95602 AL162373.1-201ENST00000620433 407 ntBASIC1.58□□□□□ -2.16
POLR1AO95602 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
POLR1AO95602 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.57□□□□□ -2.16
POLR1AO95602 AC021382.1-201ENST00000483523 359 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC008127.2-201ENST00000549925 1075 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.57□□□□□ -2.16
POLR1AO95602 AC112191.3-201ENST00000604371 277 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 MIR17-201ENST00000385012 84 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC096533.1-201ENST00000411645 353 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.57□□□□□ -2.16
POLR1AO95602 AL591212.2-201ENST00000433923 257 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC015922.2-201ENST00000435593 184 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.57□□□□□ -2.16
POLR1AO95602 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.57□□□□□ -2.16
POLR1AO95602 AC105252.1-201ENST00000503089 286 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.57□□□□□ -2.16
POLR1AO95602 SNORA31.16-201ENST00000516773 139 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.57□□□□□ -2.16
POLR1AO95602 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
POLR1AO95602 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.57□□□□□ -2.16
POLR1AO95602 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.57□□□□□ -2.16
POLR1AO95602 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
POLR1AO95602 RNA5SP257-201ENST00000363023 116 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 RNU6-799P-201ENST00000363567 107 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 SNORA51.2-201ENST00000364595 132 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 SNORA51.12-201ENST00000384448 134 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 RNU6-516P-201ENST00000411381 104 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 CYCSP48-201ENST00000417124 323 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 AC079780.1-201ENST00000428259 207 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 AC114801.2-201ENST00000503825 781 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 NBEAP1-201ENST00000554452 979 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 SNORD84-203ENST00000584275 78 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 AC245884.12-201ENST00000615364 59 ntBASIC1.56□□□□□ -2.16
POLR1AO95602 RNU4-38P-201ENST00000364472 129 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.55□□□□□ -2.16
POLR1AO95602 MIR216A-201ENST00000385063 110 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 RNA5SP38-201ENST00000410750 119 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 RNA5SP498-201ENST00000411342 120 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1AO95602 HMGN2P30-201ENST00000423237 256 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 RNU6-1132P-201ENST00000459214 107 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 LDHBP3-201ENST00000514909 822 ntBASIC1.55□□□□□ -2.16
POLR1AO95602 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1AO95602 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.55□□□□□ -2.16
POLR1AO95602 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
POLR1AO95602 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
POLR1AO95602 RNA5SP62-201ENST00000363457 110 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 RNA5SP139-201ENST00000364340 117 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 MIR627-201ENST00000384979 97 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.54□□□□□ -2.16
POLR1AO95602 RPL23AP33-201ENST00000442301 452 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.54□□□□□ -2.16
POLR1AO95602 AC096751.1-202ENST00000502691 1067 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 PCNAP1-201ENST00000505363 709 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
POLR1AO95602 AC008083.4-201ENST00000615076 444 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AC021755.4-201ENST00000616620 456 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AC022079.2-201ENST00000619739 566 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AL138955.1-201ENST00000622881 1040 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms