Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 BZW1P2-201ENST00000473537 826 ntBASIC3.07□□□□□ -1.92
SIX3O95343 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.07□□□□□ -1.92
SIX3O95343 AC112204.1-201ENST00000502591 103 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC138853.1-201ENST00000503549 823 ntBASIC3.07□□□□□ -1.92
SIX3O95343 RNU6-1129P-201ENST00000515964 104 ntBASIC3.07□□□□□ -1.92
SIX3O95343 RNU6-232P-201ENST00000517144 64 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC025881.1-201ENST00000518851 512 ntBASIC3.07□□□□□ -1.92
SIX3O95343 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
SIX3O95343 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX3O95343 AC090888.1-201ENST00000561335 1141 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX3O95343 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.07□□□□□ -1.92
SIX3O95343 NIFKP6-201ENST00000598115 845 ntBASIC3.07□□□□□ -1.92
SIX3O95343 CKS1BP3-201ENST00000600888 237 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC107294.3-201ENST00000609211 526 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AL355472.4-201ENST00000610233 626 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC245517.5-201ENST00000611529 162 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC004223.4-201ENST00000612426 332 ntBASIC3.07□□□□□ -1.92
SIX3O95343 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC004696.1-201ENST00000614345 607 ntBASIC3.07□□□□□ -1.92
SIX3O95343 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX3O95343 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX3O95343 MTND1P37-201ENST00000636562 264 ntBASIC3.07□□□□□ -1.92
SIX3O95343 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SIX3O95343 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIX3O95343 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX3O95343 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX3O95343 Y_RNA.97-201ENST00000363094 102 ntBASIC3.06□□□□□ -1.92
SIX3O95343 SNORA38.1-201ENST00000364172 131 ntBASIC3.06□□□□□ -1.92
SIX3O95343 Y_RNA.245-201ENST00000364493 95 ntBASIC3.06□□□□□ -1.92
SIX3O95343 RNU6-533P-201ENST00000384144 107 ntBASIC3.06□□□□□ -1.92
SIX3O95343 RPS20P2-201ENST00000402520 389 ntBASIC3.06□□□□□ -1.92
SIX3O95343 MIR1261-201ENST00000408659 82 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX3O95343 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.06□□□□□ -1.92
SIX3O95343 SRIP2-201ENST00000428470 166 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC097713.2-201ENST00000430199 356 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX3O95343 AC005094.1-201ENST00000440420 368 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX3O95343 AC118469.1-201ENST00000442943 488 ntBASIC3.06□□□□□ -1.92
SIX3O95343 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.06□□□□□ -1.92
SIX3O95343 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
SIX3O95343 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.06□□□□□ -1.92
SIX3O95343 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 Y_RNA.717-201ENST00000517106 92 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX3O95343 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX3O95343 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SIX3O95343 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX3O95343 NCAPGP2-201ENST00000557911 754 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX3O95343 AC012493.2-201ENST00000595083 291 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AL606834.2-201ENST00000602954 668 ntBASIC3.06□□□□□ -1.92
SIX3O95343 AC006023.1-201ENST00000603944 259 ntBASIC3.06□□□□□ -1.92
SIX3O95343 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX3O95343 MIR7111-201ENST00000619751 72 ntBASIC3.06□□□□□ -1.92
SIX3O95343 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX3O95343 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SIX3O95343 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIX3O95343 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
SIX3O95343 PABPC1P9-201ENST00000426076 1612 ntBASIC3.05□□□□□ -1.92
SIX3O95343 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX3O95343 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIX3O95343 AP000568.1-201ENST00000282964 442 ntBASIC3.05□□□□□ -1.92
SIX3O95343 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIX3O95343 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIX3O95343 RNU6-500P-201ENST00000362349 107 ntBASIC3.05□□□□□ -1.92
SIX3O95343 RNU5F-6P-201ENST00000362979 116 ntBASIC3.05□□□□□ -1.92
SIX3O95343 RNY3P13-201ENST00000365542 102 ntBASIC3.05□□□□□ -1.92
SIX3O95343 USP9YP26-201ENST00000421008 661 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX3O95343 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX3O95343 AL512286.1-201ENST00000439244 400 ntBASIC3.05□□□□□ -1.92
SIX3O95343 BNIP3P2-201ENST00000441221 577 ntBASIC3.05□□□□□ -1.92
SIX3O95343 MTND1P30-201ENST00000441241 901 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX3O95343 GDI2P2-201ENST00000445131 608 ntBASIC3.05□□□□□ -1.92
SIX3O95343 Z75741.1-201ENST00000446793 314 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC020550.1-201ENST00000447385 163 ntBASIC3.05□□□□□ -1.92
SIX3O95343 ELOCP23-201ENST00000452014 332 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX3O95343 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
SIX3O95343 MTCYBP35-201ENST00000503630 1137 ntBASIC3.05□□□□□ -1.92
SIX3O95343 RNU6-1003P-201ENST00000517099 105 ntBASIC3.05□□□□□ -1.92
SIX3O95343 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX3O95343 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
SIX3O95343 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIX3O95343 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX3O95343 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.05□□□□□ -1.92
SIX3O95343 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX3O95343 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX3O95343 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX3O95343 MIR4325-201ENST00000583049 90 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms