Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 FAM35CP-201ENST00000554755 2470 ntBASIC3.54□□□□□ -1.84
RTN3O95197 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN3O95197 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN3O95197 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RTN3O95197 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN3O95197 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
RTN3O95197 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN3O95197 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.54□□□□□ -1.84
RTN3O95197 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN3O95197 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN3O95197 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN3O95197 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
RTN3O95197 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN3O95197 SNORD97-201ENST00000459187 142 ntBASIC3.54□□□□□ -1.84
RTN3O95197 snoU109.1-201ENST00000459339 135 ntBASIC3.54□□□□□ -1.84
RTN3O95197 MTCO2P29-201ENST00000465212 189 ntBASIC3.54□□□□□ -1.84
RTN3O95197 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.54□□□□□ -1.84
RTN3O95197 Y_RNA.672-201ENST00000516289 104 ntBASIC3.54□□□□□ -1.84
RTN3O95197 SNORD59.2-201ENST00000516873 68 ntBASIC3.54□□□□□ -1.84
RTN3O95197 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.54□□□□□ -1.84
RTN3O95197 AC011979.2-201ENST00000527568 352 ntBASIC3.54□□□□□ -1.84
RTN3O95197 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN3O95197 AC034105.3-201ENST00000565294 442 ntBASIC3.54□□□□□ -1.84
RTN3O95197 MIR4506-201ENST00000584693 77 ntBASIC3.54□□□□□ -1.84
RTN3O95197 AC010620.1-201ENST00000601088 1102 ntBASIC3.54□□□□□ -1.84
RTN3O95197 AP000860.1-201ENST00000605250 559 ntBASIC3.54□□□□□ -1.84
RTN3O95197 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN3O95197 FRG1KP-201ENST00000623592 341 ntBASIC3.54□□□□□ -1.84
RTN3O95197 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.54□□□□□ -1.84
RTN3O95197 AC022336.2-201ENST00000568966 2538 ntBASIC3.54□□□□□ -1.84
RTN3O95197 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
RTN3O95197 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RTN3O95197 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN3O95197 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN3O95197 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN3O95197 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN3O95197 RNA5SP197-201ENST00000363357 119 ntBASIC3.53□□□□□ -1.84
RTN3O95197 RNU2-8P-201ENST00000410727 190 ntBASIC3.53□□□□□ -1.84
RTN3O95197 RN7SKP123-201ENST00000410732 291 ntBASIC3.53□□□□□ -1.84
RTN3O95197 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN3O95197 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN3O95197 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC007919.1-201ENST00000429380 217 ntBASIC3.53□□□□□ -1.84
RTN3O95197 FCF1P1-201ENST00000432690 571 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC119618.1-201ENST00000434191 222 ntBASIC3.53□□□□□ -1.84
RTN3O95197 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN3O95197 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN3O95197 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN3O95197 PGBD4P3-201ENST00000440731 581 ntBASIC3.53□□□□□ -1.84
RTN3O95197 MTND6P13-201ENST00000443510 523 ntBASIC3.53□□□□□ -1.84
RTN3O95197 MTATP6P30-201ENST00000443540 664 ntBASIC3.53□□□□□ -1.84
RTN3O95197 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN3O95197 AL033528.1-201ENST00000453780 140 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC013267.1-201ENST00000458227 267 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AL135752.1-201ENST00000479477 471 ntBASIC3.53□□□□□ -1.84
RTN3O95197 LARP1BP2-201ENST00000486594 519 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC006483.1-201ENST00000487308 313 ntBASIC3.53□□□□□ -1.84
RTN3O95197 FCF1P3-201ENST00000496394 590 ntBASIC3.53□□□□□ -1.84
RTN3O95197 KCTD9P5-201ENST00000504141 1170 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC110794.1-201ENST00000505816 425 ntBASIC3.53□□□□□ -1.84
RTN3O95197 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN3O95197 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.53□□□□□ -1.84
RTN3O95197 Y_RNA.695-201ENST00000516715 107 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC128657.1-201ENST00000549459 145 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AMZ2P1-203ENST00000565833 850 ntBASIC3.53□□□□□ -1.84
RTN3O95197 HMGB1P6-201ENST00000569046 646 ntBASIC3.53□□□□□ -1.84
RTN3O95197 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
RTN3O95197 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC005771.1-201ENST00000585581 349 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN3O95197 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN3O95197 AC079089.3-201ENST00000603094 673 ntBASIC3.53□□□□□ -1.84
RTN3O95197 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC008250.2-201ENST00000615261 205 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AL356321.1-201ENST00000621360 228 ntBASIC3.53□□□□□ -1.84
RTN3O95197 AC026422.1-201ENST00000623961 452 ntBASIC3.53□□□□□ -1.84
RTN3O95197 MTND1P37-201ENST00000636562 264 ntBASIC3.53□□□□□ -1.84
RTN3O95197 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN3O95197 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RTN3O95197 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN3O95197 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.85
RTN3O95197 AC008264.2-201ENST00000610193 3731 ntBASIC3.52□□□□□ -1.85
RTN3O95197 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN3O95197 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTN3O95197 RNU6-511P-201ENST00000363496 107 ntBASIC3.52□□□□□ -1.85
RTN3O95197 U3.11-201ENST00000364476 212 ntBASIC3.52□□□□□ -1.85
RTN3O95197 SNORA40.3-201ENST00000390964 122 ntBASIC3.52□□□□□ -1.85
RTN3O95197 RN7SKP142-201ENST00000411236 328 ntBASIC3.52□□□□□ -1.85
RTN3O95197 RPS3AP3-201ENST00000411933 242 ntBASIC3.52□□□□□ -1.85
RTN3O95197 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN3O95197 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 AL589872.1-201ENST00000426602 288 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC137499.1-201ENST00000427602 88 ntBASIC3.52□□□□□ -1.85
RTN3O95197 BNIP3P2-201ENST00000441221 577 ntBASIC3.52□□□□□ -1.85
RTN3O95197 PIGFP3-201ENST00000441918 722 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN3O95197 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms