Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AL133547.1-201ENST00000448546 220 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.25□□□□□ -1.89
NKX2-2O95096 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-2O95096 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AL160314.1-201ENST00000490836 438 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC023194.1-201ENST00000493084 308 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC104619.4-201ENST00000510773 249 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC010493.1-201ENST00000513479 292 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX2-2O95096 RN7SKP60-201ENST00000516985 239 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX2-2O95096 AC104763.2-201ENST00000604179 382 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC110741.2-201ENST00000605278 268 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC008962.1-201ENST00000605729 304 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 MIR7851-201ENST00000610611 160 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AL592295.2-201ENST00000612578 206 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC068831.7-201ENST00000616954 363 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC039056.2-201ENST00000622261 511 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 AC084035.1-201ENST00000634543 607 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 OR5H6-203ENST00000642105 978 ntBASIC3.25□□□□□ -1.89
NKX2-2O95096 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.25□□□□□ -1.89
NKX2-2O95096 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NKX2-2O95096 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-2O95096 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-2O95096 RPS4XP5-202ENST00000449995 1334 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 RPL7P26-201ENST00000333817 754 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 Y_RNA.126-201ENST00000363382 111 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-2O95096 MIR554-201ENST00000384874 96 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-2O95096 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC073464.1-201ENST00000429823 534 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC018644.1-201ENST00000429934 551 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 HMGB1P27-201ENST00000431429 603 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 RPL23AP30-201ENST00000432419 501 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AL512844.2-201ENST00000433990 593 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 MTND1P34-201ENST00000438556 671 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 PIGFP3-201ENST00000441918 722 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC022364.2-201ENST00000457963 554 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 U3.44-201ENST00000458938 192 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC126389.1-201ENST00000477436 290 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC106707.2-201ENST00000484182 374 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC107401.1-201ENST00000503426 685 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC117522.1-201ENST00000509821 380 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 SNORD27.1-201ENST00000516319 72 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 RNU1-45P-201ENST00000517191 141 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 TRMT10BP1-201ENST00000519377 943 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC245505.1-201ENST00000556398 224 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 HMGB1P14-201ENST00000557424 591 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC034105.3-201ENST00000565294 442 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-2O95096 AC024619.4-201ENST00000580924 316 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AL121992.2-201ENST00000606262 256 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC073534.2-201ENST00000620377 381 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC009161.2-201ENST00000624626 138 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX2-2O95096 OR5AK4P-201ENST00000635912 903 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 AC009093.8-201ENST00000641769 292 ntBASIC3.24□□□□□ -1.89
NKX2-2O95096 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-2O95096 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.24□□□□□ -1.89
NKX2-2O95096 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-2O95096 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-2O95096 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-2O95096 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 RNU6-1167P-201ENST00000363227 94 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 Y_RNA.367-201ENST00000365544 101 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 RNU6-641P-201ENST00000384006 107 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms