Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SUMO2P6-201ENST00000505273 288 ntBASIC1.54□□□□□ -2.16
LTN1O94822 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.54□□□□□ -2.16
LTN1O94822 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.54□□□□□ -2.16
LTN1O94822 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LTN1O94822 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.54□□□□□ -2.16
LTN1O94822 AC005332.10-201ENST00000612725 619 ntBASIC1.54□□□□□ -2.16
LTN1O94822 AC020658.4-201ENST00000613987 684 ntBASIC1.54□□□□□ -2.16
LTN1O94822 AC073592.7-201ENST00000623659 507 ntBASIC1.54□□□□□ -2.16
LTN1O94822 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LTN1O94822 PGBD4P6-201ENST00000421501 610 ntBASIC1.54□□□□□ -2.16
LTN1O94822 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
LTN1O94822 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
LTN1O94822 HMGB1P38-201ENST00000490557 577 ntBASIC1.54□□□□□ -2.16
LTN1O94822 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LTN1O94822 RN7SKP265-201ENST00000516448 223 ntBASIC1.54□□□□□ -2.16
LTN1O94822 SETP7-201ENST00000552169 453 ntBASIC1.54□□□□□ -2.16
LTN1O94822 AP003117.1-201ENST00000602771 554 ntBASIC1.54□□□□□ -2.16
LTN1O94822 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.53□□□□□ -2.16
LTN1O94822 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LTN1O94822 RNU2-32P-201ENST00000411193 191 ntBASIC1.53□□□□□ -2.16
LTN1O94822 MTND4LP21-201ENST00000415303 295 ntBASIC1.53□□□□□ -2.16
LTN1O94822 ARL5AP3-201ENST00000439327 386 ntBASIC1.53□□□□□ -2.16
LTN1O94822 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
LTN1O94822 RNU6-405P-201ENST00000516637 110 ntBASIC1.53□□□□□ -2.16
LTN1O94822 RNU6-467P-201ENST00000517027 110 ntBASIC1.53□□□□□ -2.16
LTN1O94822 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.53□□□□□ -2.16
LTN1O94822 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
LTN1O94822 AL449363.1-201ENST00000617815 186 ntBASIC1.53□□□□□ -2.16
LTN1O94822 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LTN1O94822 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.17
LTN1O94822 MIR222-201ENST00000384992 110 ntBASIC1.52□□□□□ -2.17
LTN1O94822 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
LTN1O94822 ATG12P2-201ENST00000456830 416 ntBASIC1.52□□□□□ -2.17
LTN1O94822 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 AC022447.3-201ENST00000506865 495 ntBASIC1.52□□□□□ -2.17
LTN1O94822 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 OR10V3P-201ENST00000525712 725 ntBASIC1.52□□□□□ -2.17
LTN1O94822 GLYCAM1-201ENST00000546596 285 ntBASIC1.52□□□□□ -2.17
LTN1O94822 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.52□□□□□ -2.17
LTN1O94822 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.52□□□□□ -2.17
LTN1O94822 AP001486.3-201ENST00000615334 372 ntBASIC1.52□□□□□ -2.17
LTN1O94822 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.52□□□□□ -2.17
LTN1O94822 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.52□□□□□ -2.17
LTN1O94822 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LTN1O94822 Y_RNA.295-201ENST00000364918 102 ntBASIC1.52□□□□□ -2.17
LTN1O94822 MIR513A1-201ENST00000385138 129 ntBASIC1.52□□□□□ -2.17
LTN1O94822 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.52□□□□□ -2.17
LTN1O94822 AL034374.1-201ENST00000406329 351 ntBASIC1.52□□□□□ -2.17
LTN1O94822 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.52□□□□□ -2.17
LTN1O94822 FABP5P5-201ENST00000515537 406 ntBASIC1.52□□□□□ -2.17
LTN1O94822 AP000907.2-201ENST00000530827 353 ntBASIC1.52□□□□□ -2.17
LTN1O94822 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 AC123912.5-201ENST00000605470 343 ntBASIC1.52□□□□□ -2.17
LTN1O94822 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LTN1O94822 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.52□□□□□ -2.17
LTN1O94822 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LTN1O94822 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.51□□□□□ -2.17
LTN1O94822 DDX10P1-201ENST00000448545 1933 ntBASIC1.51□□□□□ -2.17
LTN1O94822 MTND4P27-201ENST00000450813 1354 ntBASIC1.51□□□□□ -2.17
LTN1O94822 AC009812.4-201ENST00000569134 1805 ntBASIC1.51□□□□□ -2.17
LTN1O94822 RNU1-133P-201ENST00000364867 167 ntBASIC1.51□□□□□ -2.17
LTN1O94822 RPL21P32-201ENST00000419877 477 ntBASIC1.51□□□□□ -2.17
LTN1O94822 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.51□□□□□ -2.17
LTN1O94822 AC234781.2-201ENST00000426370 994 ntBASIC1.51□□□□□ -2.17
LTN1O94822 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LTN1O94822 MTND2P29-201ENST00000438595 412 ntBASIC1.51□□□□□ -2.17
LTN1O94822 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LTN1O94822 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
LTN1O94822 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.51□□□□□ -2.17
LTN1O94822 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LTN1O94822 RNU6-629P-201ENST00000384061 103 ntBASIC1.5□□□□□ -2.17
LTN1O94822 RNU1-148P-201ENST00000384472 162 ntBASIC1.5□□□□□ -2.17
LTN1O94822 SNORD56-201ENST00000413522 71 ntBASIC1.5□□□□□ -2.17
LTN1O94822 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.5□□□□□ -2.17
LTN1O94822 RFC5P1-201ENST00000454419 874 ntBASIC1.5□□□□□ -2.17
LTN1O94822 SNRPFP3-201ENST00000457792 225 ntBASIC1.5□□□□□ -2.17
LTN1O94822 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.5□□□□□ -2.17
LTN1O94822 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
LTN1O94822 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LTN1O94822 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.49□□□□□ -2.17
LTN1O94822 AC005297.2-201ENST00000450430 606 ntBASIC1.49□□□□□ -2.17
LTN1O94822 SETP11-201ENST00000473027 690 ntBASIC1.49□□□□□ -2.17
LTN1O94822 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.49□□□□□ -2.17
LTN1O94822 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.49□□□□□ -2.17
LTN1O94822 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LTN1O94822 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.49□□□□□ -2.17
LTN1O94822 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LTN1O94822 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.49□□□□□ -2.17
LTN1O94822 AL121601.2-201ENST00000438019 707 ntBASIC1.49□□□□□ -2.17
LTN1O94822 RABEPKP1-201ENST00000440529 1026 ntBASIC1.49□□□□□ -2.17
LTN1O94822 AC118942.1-201ENST00000529674 1035 ntBASIC1.49□□□□□ -2.17
LTN1O94822 UBE2L4-201ENST00000587688 464 ntBASIC1.49□□□□□ -2.17
LTN1O94822 AC021755.4-201ENST00000616620 456 ntBASIC1.49□□□□□ -2.17
LTN1O94822 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.49□□□□□ -2.17
LTN1O94822 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.48□□□□□ -2.17
LTN1O94822 AC009902.3-201ENST00000606235 2172 ntBASIC1.48□□□□□ -2.17
LTN1O94822 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.48□□□□□ -2.17
LTN1O94822 RNU4-38P-201ENST00000364472 129 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms